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scnpilot_p_inoc_scaffold_18643_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..617)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein, TolC family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T577_ACIDE similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 206.0
  • Bit_score: 294
  • Evalue 6.70e-77
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:EER60372.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 206.0
  • Bit_score: 294
  • Evalue 9.40e-77
TolC family type I secretion outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 209.0
  • Bit_score: 280
  • Evalue 2.80e-73

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Taxonomy

Acidovorax delafieldii → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGACCCCGTTCCGCCGTCTCCCCCTTGCGCTGGCCCTGGCCGCGCTGGCCTGCTCCGCACAGGCGCAAAGCCTGCTGGCCCTGGTGGAACAGGCCCGTGGCTACGACGCCGCCTGGCAGTCCGCCAAGGCGCAGATGGACGCCGCCGCCAGCCGCGCCGAACAGGCGCGCGCCGGCCTGCTGCCCAGCGCCGGCCTGTCGGCCGGGGTGTCCACCGCGCGCACCGAGGTCAGCCGCCCGGAGATCAACCTCACCACGCCGAACCGCAACGTCACGCTGTCGGCCTCGCAGCCGCTGTACCGGCCGGCCAACCGCATCGGCTACGCGCAGGGGCAGCGCGGCATTGACGTGGCCCAGGCGCAGCTCGACGCCGCCACGCAGGACCTGCTGGTGCGCGTGAGCCAGGGCTATTTCGACGTGCTGGCGGCGCAGGACACGCTGGCCTTCGTGCGCGCGCAAAAGGCCGCGGTGGAGGAACAGCTCGCGGCGGCCAAGCGCAATTTCGAGGTCGGCACCAGCACCATCACCGACCAGCGCGAAGCCCAGGCACGCTACGACATCGTCGTCGCGCAGGAAATCGCGGCCGAGAACGACCTGCACGTCAAGCGCCTGGCG
PROTEIN sequence
Length: 205
MTPFRRLPLALALAALACSAQAQSLLALVEQARGYDAAWQSAKAQMDAAASRAEQARAGLLPSAGLSAGVSTARTEVSRPEINLTTPNRNVTLSASQPLYRPANRIGYAQGQRGIDVAQAQLDAATQDLLVRVSQGYFDVLAAQDTLAFVRAQKAAVEEQLAAAKRNFEVGTSTITDQREAQARYDIVVAQEIAAENDLHVKRLA