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scnpilot_p_inoc_scaffold_20599_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1775..2656)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XIW6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 288.0
  • Bit_score: 433
  • Evalue 1.30e-118
  • rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:EFF73219.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achro similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 288.0
  • Bit_score: 433
  • Evalue 1.90e-118
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 286.0
  • Bit_score: 235
  • Evalue 1.50e-59

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Taxonomy

Achromobacter piechaudii → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGCAAAGTCGCTCATTGCGCGCTTTCTTGGCGCTTCACCAGTTCGGCACGGTGGCGGCCGCGGCCCGGGCGGTCCACTTATCGCCAGCTGCTGTAAGCGTTCAGCTGCGTAATCTTGAAGACGAACTTGACGTCGAATTATTCATCCGCACCGGGCGCTCAATATCTTTGAATGATCGAGCGCACCAGCTCGTGCCCTTGGCAAGACGGATGCTGGACCTACAGTCTGAAATGGCGTCGCTGGGAAACTCCAGGAGTTTGAAAGGCAAGATGGCTCTGGGAATAATTACAAGCACATTGACTGGAGGCTTGCCTGGAGTATTGAAACGTCTTGGAGCGGAACATCCTCAGCTGGAACTGCGGATTACGGCGAAGAGATCCCCCGATCTGGCAACGTTGGTCGAAGCAGGTTTATTAGACGCAGCGATCATATCGAGGCCTCCGCCAAATATTCCAACATCACTCTGCTTCCAAGCGTTGTACAGGGAACCGTTGGCCTTAGTCATGAGCGCGCAGCGAAACTTCACCAATATCAAAGATGCATTAGAAGAGCAACCATATATTGCCTTTGATAAAACAACATGGATAGGCAAACAGATCGAGTCTTTTATCGAGACCAGCGGGCTATCCGTCCGCCCCGTCATGGAGCTCGACTCCCATGACGCTGTCTTATCGATAGTTCGGCACGATATAGGAGTGACTATCCTTCCCGTGCTGAAAGGGCATCCACGGAAAGACCCCTCGCTGAGATTCATGGATTTGCCCAGCATACACCGGGAAGTATGCCTTGCCGTCAGGCACGCAAATAAAGACAGCAGGGCGACGCAAGTTCTGGTGAATTATTTCAGAGAGTTTGGCAATTCCGCGCCGCTCACGAAGTAA
PROTEIN sequence
Length: 294
MQSRSLRAFLALHQFGTVAAAARAVHLSPAAVSVQLRNLEDELDVELFIRTGRSISLNDRAHQLVPLARRMLDLQSEMASLGNSRSLKGKMALGIITSTLTGGLPGVLKRLGAEHPQLELRITAKRSPDLATLVEAGLLDAAIISRPPPNIPTSLCFQALYREPLALVMSAQRNFTNIKDALEEQPYIAFDKTTWIGKQIESFIETSGLSVRPVMELDSHDAVLSIVRHDIGVTILPVLKGHPRKDPSLRFMDLPSIHREVCLAVRHANKDSRATQVLVNYFREFGNSAPLTK*