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scnpilot_p_inoc_scaffold_19700_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2182..2850

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit n=1 Tax=Nitratireductor indicus C115 RepID=K2P6V5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 223.0
  • Bit_score: 277
  • Evalue 9.20e-72
Membrane protein {ECO:0000313|EMBL:EZQ14968.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.; similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 209.0
  • Bit_score: 358
  • Evalue 7.50e-96
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 209.0
  • Bit_score: 241
  • Evalue 2.70e-61

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCGTATCGCTATCCCCACCGCTGCACGCGCGGCGGCTGCATTGACGCTTGCCGCCGGGCTCGTGGCGACATCCCCGGTGCTTGCCACCGACACCTCAACGCTCAGCACGCAAACCGTGCCGGAATGGAAAGCGGTCTACGGAAGGGTGGAGGCACGCGATCTCGTGTCGGCGCGCGCGCGCATCGGTGGCACCGTCGTCGAGCTTCTCGTCTCGGAAGGCGACACGGTTGCGGCCGGTCAGCGCATCGCCATGGTGCGGGACGACAAGCTTGCCTTCCAGGTCGCCGCTATCGATGCGCAACTGCGCGTGCTGGACGCCCAGCTTTCGCGAGCCGAAGCCGAACTGTCCCGCGGGCGCTCGCTGGTCGAGCGCGGGGTCAGCACCGCGCAGCGGCTGGAGCAATTGCAGACCGATGTGGAAGTGACGCGCAATCAGATCGTCGCCACGCAGGCGCAACGCTCGGTCGTTGTCCAGCAGGGCGAGGAGGGCGCCGTACTCGCGCCGGTATCCGGCGTAGTGCTCGGCGTGCCAATCACGCGCGATACGGTCATCATGGCCGGTGAAGCTGTAGCTACTGTCGGCGGAGGCGGCTTTTTCCTGAGGTTGGCGATCCCCGAACGCCATGCCGATGCCTTGAAGGAAGGCGCTGAAATCCGCGTTTCGGCC
PROTEIN sequence
Length: 223
MRIAIPTAARAAAALTLAAGLVATSPVLATDTSTLSTQTVPEWKAVYGRVEARDLVSARARIGGTVVELLVSEGDTVAAGQRIAMVRDDKLAFQVAAIDAQLRVLDAQLSRAEAELSRGRSLVERGVSTAQRLEQLQTDVEVTRNQIVATQAQRSVVVQQGEEGAVLAPVSGVVLGVPITRDTVIMAGEAVATVGGGGFFLRLAIPERHADALKEGAEIRVSA