ggKbase home page

scnpilot_p_inoc_scaffold_21295_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1348..2154

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002DA5C68 similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 260.0
  • Bit_score: 302
  • Evalue 5.50e-79
Uncharacterized protein {ECO:0000313|EMBL:EJL90816.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 260.0
  • Bit_score: 281
  • Evalue 1.10e-72
putative oxidoreductase, SDR family similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 260.0
  • Bit_score: 277
  • Evalue 5.30e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGGCGATGGGCAAGCGACTCGAAGGCAAGGTGGCCATCGTCACGGGCGCGGGCACGCGCGGCGACGGCATCGGCAACGGCAAGGCCTGCGCCATCCTGTATGCGCGTGAGGGCGCGAAGGTGATCGCGGCCGACCTCGACCCCGCACTGGCGGAGGCGACCGCGGCGATGATTCGTGAAGAGGGCGGCGAATGCATTCCCTTCCGCGCGGACGTTTCGCGCGCGGAGGATTGCCGCGCAATGGTGGGCGAATGCATCTCGCGGTTCGGACGCATCGACGTGCTGCACAACAACGTCGGCATCACCAATTCCGGCGGCCCCGTGGACTATGCGGAAGAGCAGTGGGACCGCATGATGAACGTGAACGCCAAGAGCATGTTCCTCACGGCGAAGTTCGCTTTGCCGCACATGGAGCGGCAGCGGTCCGGCTCCATCGTGAACATCGGCTCGATCAACGGCGAGCGCGCCATCCCGTTCCCGAAGTTCGCCTATGCGGCGTCGAAGGCCGCGATGATCGCGATGTCCCGCGAGATCGCGATCCAGTACGCGCCCCTTGGGATTCGCAGCAATGTGGTCCTGGTCGGGCTGATCAAGTCGCCGATCGTCGAGCAGAACAACACGAAGCTCTATGGCGGCGACCTCGACGAAATGTGGAAATTGCGAGACGCGATGTCACCGACGGGGCGACAGGGCGAGGTCTGGGACATAGCGAACGCCAGCCTGTTTTTCGCTTCGGACGAGTCGCGCTATGTGAACGGCACGGTGCTGCCGGTGGATGGCGGATTGATCAACATGGTGAAGTTGTAG
PROTEIN sequence
Length: 269
MAMGKRLEGKVAIVTGAGTRGDGIGNGKACAILYAREGAKVIAADLDPALAEATAAMIREEGGECIPFRADVSRAEDCRAMVGECISRFGRIDVLHNNVGITNSGGPVDYAEEQWDRMMNVNAKSMFLTAKFALPHMERQRSGSIVNIGSINGERAIPFPKFAYAASKAAMIAMSREIAIQYAPLGIRSNVVLVGLIKSPIVEQNNTKLYGGDLDEMWKLRDAMSPTGRQGEVWDIANASLFFASDESRYVNGTVLPVDGGLINMVKL*