ggKbase home page

scnpilot_p_inoc_scaffold_21338_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(348..824)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L15 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWC6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 158.0
  • Bit_score: 242
  • Evalue 2.30e-61
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea. similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 159.0
  • Bit_score: 266
  • Evalue 2.10e-68
rplO; 50S ribosomal protein L15 similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 158.0
  • Bit_score: 239
  • Evalue 7.30e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGAAACTCAATGAGATCCGTGACAACGAAGGCGCTCTGAAGCAGCGCATGCGTGTCGGCCGTGGCATTGGCTCCGGCAAGGGCAAGACCGGTGGCCGCGGCGTGAAGGGTCAGACCTCGCGCGCCGGCGTCGCCATCAAGGGCTTCGAAGGCGGCCAGATGCCGCTGTATCGTCGCCTGCCGAAGCGCGGCTTCAACAACCTGTTCGCCAAGGACCTGAACGAGGTGAACCTCGGCCGGATCCAGCAGGCGGTGGAAGCCGGCAAGCTCGATGCCAAGGGCACCGTGACCATCGAGGCGCTCGTCGCCGCCGGTGTCATCACCCGCCAGGCCAAGGACGGCGTCAAGATTCTCGGCGTCGGCGAGCTCAAGACCAAGCTTGCCTTCGAGGTGTACGGCGCGTCCAAGTCGGCCGTCGCTGCGATCGAGAAGGCTGGCGGTTCGGTCAAGATTCTGGCTGCCGCTTCACAGGCGTGA
PROTEIN sequence
Length: 159
MKLNEIRDNEGALKQRMRVGRGIGSGKGKTGGRGVKGQTSRAGVAIKGFEGGQMPLYRRLPKRGFNNLFAKDLNEVNLGRIQQAVEAGKLDAKGTVTIEALVAAGVITRQAKDGVKILGVGELKTKLAFEVYGASKSAVAAIEKAGGSVKILAAASQA*