ggKbase home page

scnpilot_p_inoc_scaffold_21430_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1279..1920)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W575_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 205.0
  • Bit_score: 243
  • Evalue 2.40e-61
LuxR family transcriptional regulator {ECO:0000313|EMBL:KFC21772.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epil similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 210.0
  • Bit_score: 262
  • Evalue 4.10e-67
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 205.0
  • Bit_score: 238
  • Evalue 1.70e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Epilithonimonas lactis → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 642
ATGAGTATAGATATCAACACCCAGTTTCTTTTGGCAGATGACCACAGCCTGATTCGCCAAGCACTGTCTATTTTATTGGAAGATATTGGTATAGAGGGCGCTGTTTCCCAAGCGTCTAATCTATCTCAGGTGATGGATGTTGTCAAATCAGAATCTATCGATATTGCCATTATCGATGCCCATTTCCCCGATGGCAACAGCATGACGATAATCCCTGAAATCAAAAAAATCAACCCGGGAGTTAAAATCCTTGTCTATACTGGTGTGGATGAAAAAGCGCAGTCGCTTAAGTTTATCAACGCCGGAGCAGACGGCTTCCTGAGCAAAATGGCGGAAGAAGAAGAGACCAAACAGGCCATTCTCCAGATGCTGGAAACCGGCCAGTACCTTTCGCCAATAACCCAAGCCCTGTTGATGAGTGCGCTGCAAAACCCTCAATTGGCAGATCCGCTGAAAACACTTACCGACCGGGAACTGGAAATTGCAGAATTATACGGCCAAGGTCTCGGCAATCTTGAAATTGCCAATCGGCTCAGTCTGAAGCAAAATACAGTCAGCACCGTCAAAAAGAGAATTTTTGAAAAGTTGAATATCGAAAATATTGTTGAGCTTGCCAACCTGCTGAAGAACTACGAGAATTGA
PROTEIN sequence
Length: 214
MSIDINTQFLLADDHSLIRQALSILLEDIGIEGAVSQASNLSQVMDVVKSESIDIAIIDAHFPDGNSMTIIPEIKKINPGVKILVYTGVDEKAQSLKFINAGADGFLSKMAEEEETKQAILQMLETGQYLSPITQALLMSALQNPQLADPLKTLTDRELEIAELYGQGLGNLEIANRLSLKQNTVSTVKKRIFEKLNIENIVELANLLKNYEN*