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scnpilot_p_inoc_scaffold_23246_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1201..2514

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IET8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 437.0
  • Bit_score: 688
  • Evalue 5.80e-195
  • rbh
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:ERF82170.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Br similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 437.0
  • Bit_score: 688
  • Evalue 8.10e-195
putative type IV secretory pathway protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 437.0
  • Bit_score: 670
  • Evalue 2.70e-190

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGACCCCGTTCGAAAGCGCCTCGCCAGCGCGTAGCGTGGCGCTGCGGCTCGTACTCGCGCTCGTCGGCATCGCCGTCTTCCTGTTCGTCGGCTCCAACGTCATGCTGCTGGGCCTGCGCACCCATGATGGCGGCTTCCACTGGAACGAGATCGCGATAGCCTGGCCACATTATGGCGCCAACGAGCGCCTCGACCGCTGGATCACTTTTGGGACGCTGGCCGGCACGATCGTGGCCTTCGGGCTGATGGGGGTCGTTCTGCGGACGAAACCACGCCCACTGCATGGCGAGGCGCGCTTCGCCACCGAGCGCGATATCCGCCGGGCAGGTCTGCGAGCCAAACAAGGGATTTTGCTCGGCCGGAAGGACGGTAAGTTCCTCTGCTTCGGCGGGCCTGAGCACGTCATGGTCTATGCCCCAACCCGCTCGGGCAAGGGCGTCGGCTATGTCATTCCGAACCTGCTGAACTGGCCGGATTCCGTCGTCGCGCTCGACGTTAAGAAAGAGAATTTTGACCGGACTGGAGGATTTCGCGAGGCGAGCGGGCAGGCGGTCTTCCTATTCGATCCACTCGACGAGCAGGGCCGCACAGCGCGCTACAATCCACTCGCCTATGTCCGACGCGATCCGGTCGATCTCTATGACGATCTCCAGCGCATCGCGGTCATGTTGTTCCCGGCCGAGAACCGGGCGGATCCGTTCTGGTTCGAGACGGCGCGCTCGGCTTTTGTCGCGATCGGCGGCTATGTCGCCGAGACGCCAGGCTTGCCGCTCACCATCGGCGAGATCCTGCGTCAGCTTTCCGCCTCGAGCGATCTAAAGGCCCATTTCCTCGCCGCGATGAAACAGCGTGCCAAGAGCACGGCGCCGTTGTCATCGCACTGCATCGGGGCGCTGAACGATTTTCTGTCGGCCTCCGAAAACACAATGAACTCGGTCCGAAAAACCACGACGGCGCGGCTGGGCCTCTGGCTCAATCCGCGCATCGACGCTGCGACCTCCGCGAATGATTTCGACCTGCGCGAACTGCGGTCGCGGCCGATGTCGATTTTTCTCGGCGTGACGCCGGACAATCTCGACCGCATGGCGCCGCTGCTCAACCTGTTCTTCCAGCAGGTCATCGACCTGAACAGCCGCGAGCTGCCGGAGCAGAACGCAAAACTCAATCGCCGCCTACTGCTGTTGCTCGACGAGTTCCCGGCGCTCGGACATGTCGGCGTGCTCGCAAAATCCGTCGCCTTCGTCGCCGGCTACGGCATTCGCCTGCTCACCATCATTCAGAGCCCATCACAACTCCGGGCGATCTACGGCCCC
PROTEIN sequence
Length: 438
MTPFESASPARSVALRLVLALVGIAVFLFVGSNVMLLGLRTHDGGFHWNEIAIAWPHYGANERLDRWITFGTLAGTIVAFGLMGVVLRTKPRPLHGEARFATERDIRRAGLRAKQGILLGRKDGKFLCFGGPEHVMVYAPTRSGKGVGYVIPNLLNWPDSVVALDVKKENFDRTGGFREASGQAVFLFDPLDEQGRTARYNPLAYVRRDPVDLYDDLQRIAVMLFPAENRADPFWFETARSAFVAIGGYVAETPGLPLTIGEILRQLSASSDLKAHFLAAMKQRAKSTAPLSSHCIGALNDFLSASENTMNSVRKTTTARLGLWLNPRIDAATSANDFDLRELRSRPMSIFLGVTPDNLDRMAPLLNLFFQQVIDLNSRELPEQNAKLNRRLLLLLDEFPALGHVGVLAKSVAFVAGYGIRLLTIIQSPSQLRAIYGP