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scnpilot_p_inoc_scaffold_23338_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(393..578)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L32 n=5 Tax=Rhizobium/Agrobacterium group RepID=RL32_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 61.0
  • Bit_score: 123
  • Evalue 6.20e-26
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 61.0
  • Bit_score: 126
  • Evalue 1.70e-26
rpmF; 50S ribosomal protein L32 similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 61.0
  • Bit_score: 123
  • Evalue 1.70e-26

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
ATGGCTGTACCGAAAAGAAAAACGAGCCCGTCGAAGCGCGGTATGCGCCGTTCCGCAGACGCTCTGAAGGGTTCGACCTATGTTGAAGACAAGAACTCGGGCGAACTGCGCCGCCCGCACCACATTGACCTGAAGACCGGCATGTATCGCGGTCGCCAGGTTCTGACGCCGAAGGAAAGCGCATAA
PROTEIN sequence
Length: 62
MAVPKRKTSPSKRGMRRSADALKGSTYVEDKNSGELRRPHHIDLKTGMYRGRQVLTPKESA*