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scnpilot_p_inoc_scaffold_23338_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2340..2507

Top 3 Functional Annotations

Value Algorithm Source
Farnesyl diphosphate synthase IspA {ECO:0000313|EMBL:EYR78945.1}; EC=2.5.1.10 {ECO:0000313|EMBL:EYR78945.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobi similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 56.0
  • Bit_score: 102
  • Evalue 2.40e-19
Farnesyl diphosphate synthase IspA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCB4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 56.0
  • Bit_score: 102
  • Evalue 1.70e-19
farnesyltranstransferase similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 56.0
  • Bit_score: 65
  • Evalue 6.60e-09

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 168
ATGAGCGAACGTCACCAGGAATTCCTGTCCCTCCTGAAGGGCAATGCCGAGGCGGTGGAAACACTGCTGGCAAGCCTCTTGTCCGGCACCGTCGGGGCGGACGAAATCGCCCGGCCCGAACGGCTGCTTGCCGCCATGCGCCATGGCGTTTTGAACGGCGGCAAAAGG
PROTEIN sequence
Length: 56
MSERHQEFLSLLKGNAEAVETLLASLLSGTVGADEIARPERLLAAMRHGVLNGGKR