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scnpilot_p_inoc_scaffold_22052_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3..665

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=RL3_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 220.0
  • Bit_score: 371
  • Evalue 7.90e-100
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.; similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 221.0
  • Bit_score: 412
  • Evalue 3.30e-112
rplC; 50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 221.0
  • Bit_score: 371
  • Evalue 1.70e-100

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
CACATTCCGGTCACCGTGCTGAAGCTCGACAACTGCCAGGTCGTCGCGCATCGCACGGTCGAGAAGAACGGCTATGCCGCCGTGCAGCTCGGGTCGGGCTTGGCCAAGGTCAAGAACGTCTCGAAGGCGCAGCGCGGCCATTTCGCCGTCGCCAAGGTCGAGCCGAAGCAGAAGATCGTCGAGTTCCGCGTCAGCGATGATGCGCTGATCCCGGTCGGCGCCGAGCTCACCGCCGACCATTTCGTCGTCGGCCAGTTCGTCGACGTCTCCGGCACCACCACCGGCAAGGGCTTCGCCGGCGGCATGAAGCGCTGGAACTTCGGCGGTCTGCGTGCCACGCACGGCGTCTCGGTCTCGCATCGTTCGATCGGTTCGACCGGTGGCCGTCAGGACCCGGGCAAGACCTTCAAGAACAAGAAGATGCCGGGCCATCTCGGCGCCGAGCGCGTGACCACGCAGAACCTGCGCGTCGTCCAGACGGACGTCGAGCGCGGCCTGATCCTCGTCGAGGGCGCCGTTCCGGGCGTCGCCGGCGGTTGGATCCACGTCCGCGACGCCGTCAAGCGCGCCCTGCCGAAGGATGCGCCGCTGCCGGGCAAGTTCAAGGTTGCCGGCGAGGCAAAGGCAGAGGCTCCTGCGGCCCAGGCTGAGGAGAACGCGTGA
PROTEIN sequence
Length: 221
HIPVTVLKLDNCQVVAHRTVEKNGYAAVQLGSGLAKVKNVSKAQRGHFAVAKVEPKQKIVEFRVSDDALIPVGAELTADHFVVGQFVDVSGTTTGKGFAGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHLGAERVTTQNLRVVQTDVERGLILVEGAVPGVAGGWIHVRDAVKRALPKDAPLPGKFKVAGEAKAEAPAAQAEENA*