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scnpilot_p_inoc_scaffold_22190_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..1702

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Citrus clementina RepID=V4U912_9ROSI similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 543.0
  • Bit_score: 458
  • Evalue 9.70e-126
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:ERM94339.1}; TaxID=13333 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Ambore similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 554.0
  • Bit_score: 463
  • Evalue 3.20e-127
pre-mRNA-splicing factor SYF1-like; K12867 pre-mRNA-splicing factor SYF1 similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 535.0
  • Bit_score: 455
  • Evalue 3.40e-125
  • rbh

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Taxonomy

Amborella trichopoda → Amborella → Amborellales → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1701
TTCCAGCTGCTGCAGCCGGCACGTATCACCGCCACGCGCCGCAACTTTGACCGCGCCCTGCGCGCGCTGCCCGTCACGCAGCACTTGGCCTGGGTGTGGCCCAGCTACCTTAAGTTCGCCGACCAGTGCGGCGTCCCCGAAACGGCCATGCGCATCTGGCGCCGCTACGTCCGGCTCGCACCCGCGCAGCGCGAGGCCTTCGTTGACACGCTGCTGGCCGCCGGGCAGACCGACGCCGCGGCCGCCGAGCTCGCTGCGCTGGTCAACGACGAGCGCTTTGTCTCGCAGCGCGGCAAGACGCGCCACGACCTGTGGACGGACCTGCTCAAGCTCATCGTGCCCCACGCGGCGGCCATCACGTCGCTCGACACCGACGCCGTGCTGCGCTCCGGCATCCGCCGCTACCCGCACGAGGTCGCGCGCCTGTGGACCGCGCTGGCGGAGGTTTACACGCGCCAGGGCCTCTTCGAGCGCGCGCGCAGTATCTACGCAGAAGCCCTGGAGGCGGTCAACACTGTGCGCGACCTGGCCATCGTGTTTGACGCCTACACGCAGCACGAGGAGGGCGTGATCGAGGGCAAGATGGCCGAGCTGGAGTCGCTTCAGACCGAGCTCGACGCCTCCGTCGCTGACGAGTCGAACAACAACAACAACAACAACAGCAGCGCCAACGGCAGTGGCAGTGCGTCGACCGAGAGCGTGAGCGCCCGCAAGGCCCGGTTCGCGGCCGCGCTCAGCGCGTGCGAGCAGGAGGTTGACCTGCGCATGATGCGCCTGGACAAGCTCATCGCCTCGCGCCCGCTGCTCGTCAACACCGTGCTGCTGCGCCAGAACCCGCATAACGTGCCCGAGTGGCTCAACCGCGTCAAGCTCTGCGGCGGCGACCCGGCGCGCACGGTCTCGACCTTCGCGCTCGCAGTCGCCACGGTCGACCCCGCGCTCGCCGACGGACAGGCGCAGATGCTCTGGGCGCGCTTCGCCGCCTTTTACCAGCGCCACAAGCAATGGGGCGACGCGCGGTCCGTGTACGTGCGCGCAGTCGCAGCGCCGTACCCCACCGCCGAGGCGCTCGCGTTCGTCTGGCTCAAGTGGGCCGAGATGGAGCTCGCCGCGGGCAAGCCCCGCCGCGCGCTCGCCGTGCTGCAGCGCGCCACCACCCCTCCGCGCGACTACCGCAGCGCCGGTAGCAGCAGCAGCAGCGCCGGCTCTGCGAGTTCGCAGGCCAGCGCGAGTGTGTACAAGAACACGCGTCTGTGGGCGTTCTTGGCGGACCTGCAGGAGTCGTTGGGCCCTCTCGACGCCGCGCGCGCTGTCTACGAGCGCATGATGCAGCTGCGCGTCATCACACCCGCGCTGCTGCTCAACTACGCCAAGCTGCTGGAGGAGCACAAGCACTACGAGGACGCCTTCCGCGCCTACGAGAAGGGCGCGGCGTTGTTTCCCTATCCGGCCGTCGCGCCCGTGTGGACCGCATACTTGCGCAAATTTGTCGACCGCTACGGCGGCGCCAAGTTGGAGCGCACGCGCGACCTCTTCGAGCAGGCGCTCGCAGCCGCCCCGCAAGAGTTTTGCAGGCCCATTTACCTGCTCTACGCTCAGTTCGAGGAGCGCGTCGGCACGCCGCGGTACGTTTTTGTTAAGATAGAGACTATACGCAATATTCTGAATATGGTATTGTTTTTTCTTGTAGAATCGTTATAA
PROTEIN sequence
Length: 567
FQLLQPARITATRRNFDRALRALPVTQHLAWVWPSYLKFADQCGVPETAMRIWRRYVRLAPAQREAFVDTLLAAGQTDAAAAELAALVNDERFVSQRGKTRHDLWTDLLKLIVPHAAAITSLDTDAVLRSGIRRYPHEVARLWTALAEVYTRQGLFERARSIYAEALEAVNTVRDLAIVFDAYTQHEEGVIEGKMAELESLQTELDASVADESNNNNNNNSSANGSGSASTESVSARKARFAAALSACEQEVDLRMMRLDKLIASRPLLVNTVLLRQNPHNVPEWLNRVKLCGGDPARTVSTFALAVATVDPALADGQAQMLWARFAAFYQRHKQWGDARSVYVRAVAAPYPTAEALAFVWLKWAEMELAAGKPRRALAVLQRATTPPRDYRSAGSSSSSAGSASSQASASVYKNTRLWAFLADLQESLGPLDAARAVYERMMQLRVITPALLLNYAKLLEEHKHYEDAFRAYEKGAALFPYPAVAPVWTAYLRKFVDRYGGAKLERTRDLFEQALAAAPQEFCRPIYLLYAQFEERVGTPRYVFVKIETIRNILNMVLFFLVESL*