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scnpilot_p_inoc_scaffold_22227_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..676

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI000379EA53 similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 224.0
  • Bit_score: 418
  • Evalue 4.40e-114
LysR family transcriptional regulator {ECO:0000313|EMBL:EHH09959.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 224.0
  • Bit_score: 416
  • Evalue 1.80e-113
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 224.0
  • Bit_score: 413
  • Evalue 5.20e-113

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Taxonomy

Mesorhizobium amorphae → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
GGCGTCGTGCGCGTCGGCGGCGTGCCCTTCTTCATGGATGCGATGATCAGCCGGATGATCGGCGAGTTCCAGAACCACGAGCCGGAGATCACCATCCAGAAGAGCTATCTCAACCTGCCCGAGATGGTGTCCGCGCTCGAGGGCCGGCAGATCGATCTCGGCATCGTGCCGATCGGCGTGCTCGATCTCGGGCCGGGCTTCGAGTTCACCGAGATCCTGCCCGGCCGCAACATCGTCGCCTGCCGCCCGCAGCATCCGCTGCTGCGCAACCGGCGTCTCCGCGCCCACGACCTGACGAGCTTCCCCTGGGTCGCGCCGCTGCCCGGCTCGCCGCTGATGTCCGACCTGCAGATGATCCTGATGAGCATCGGCATGTCGGATCTGAATGTGCGCTATTCAGGCGGCTCGCTGATGAGCGTCATCAACTACCTGGCCGAGACCGATGCGCTGGCCGTGCTGCCCTTCTCGGTCGTCTTCGCGCAGCGCAAGGAAAACCGCGTCACGGTCCTTCCCTACGAGATCCCGCAGCCCAACCGCTCCCTCGGCATCCTCCGCCGCACCGGAGGCCCCCGCTCCGCCGCCGCCGAACGCTTCGCGGGCTATGTCACCGCGGCGTTCGAGGACCTGAAGCACATCATCAAGCGGCACGAGAACGCGGTGGTCTGGGGGAGGTAG
PROTEIN sequence
Length: 225
GVVRVGGVPFFMDAMISRMIGEFQNHEPEITIQKSYLNLPEMVSALEGRQIDLGIVPIGVLDLGPGFEFTEILPGRNIVACRPQHPLLRNRRLRAHDLTSFPWVAPLPGSPLMSDLQMILMSIGMSDLNVRYSGGSLMSVINYLAETDALAVLPFSVVFAQRKENRVTVLPYEIPQPNRSLGILRRTGGPRSAAAERFAGYVTAAFEDLKHIIKRHENAVVWGR*