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scnpilot_p_inoc_scaffold_22674_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 926..1231

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S14 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLI6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 101.0
  • Bit_score: 191
  • Evalue 5.20e-46
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 101.0
  • Bit_score: 191
  • Evalue 7.20e-46
rpsN; 30S ribosomal protein S14 similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 101.0
  • Bit_score: 187
  • Evalue 1.60e-45

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGGCGAAAACGAGCGCAGTTGAAAAGAACAAGCGCCGCCGCAAACTGGTTGCCAGCCAGGCCGCTAAGCGTGCCGCCCTCAAGGCGATCATCCAGAATCAGACTCTTCCGATCGAAGAGCGCTTCAAGGCGACCCTGAAGCTTGCCGAACTGCCGCGCAATGGTTCCAAGACCCGCATCCGTAACCGGTGCGAAGTCACGGGTCGTCCGCGTGCATTCTATCGCAAACTCAAGATGTCGCGTATTGCGCTTCGCGAACTGGGCAATCTCGGCAAGGTGCCGGGTATTGTCAAGTCGAGCTGGTAA
PROTEIN sequence
Length: 102
MAKTSAVEKNKRRRKLVASQAAKRAALKAIIQNQTLPIEERFKATLKLAELPRNGSKTRIRNRCEVTGRPRAFYRKLKMSRIALRELGNLGKVPGIVKSSW*