ggKbase home page

scnpilot_p_inoc_scaffold_22752_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 756..1859

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Populus trichocarpa RepID=B9HXA3_POPTR similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 113.0
  • Bit_score: 98
  • Evalue 1.60e-17
Uncharacterized protein {ECO:0000313|EMBL:EEF01637.1}; TaxID=3694 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 113.0
  • Bit_score: 98
  • Evalue 2.30e-17
baaA1; trimeric autotransporter adhesin similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 166.0
  • Bit_score: 62
  • Evalue 2.80e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Populus trichocarpa → Populus → Malpighiales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1104
ATGTCTTCAGGACGTGCTGCCGCGTCTAAGGCGGTTACTTCCTCCAAGGCATGCACTGCCCGCTCCAGCGTCAGTGACGACGACGCCTCCGCCGCCTCTGACGCCGAGGCCGCGACTACAGACGCTGCGAGTGACTCTGAGGCGGACAGCGACTTTGGCGGCGACGCTGAGGACGACATTGATCTCGACGCGCTCGTGTCCAAGGCTGCGTCACGCCTCTCGGCGCTGGCCTCCGCGACTGCCGCCGCGTCTGCCACGACCGCGGCGTCCGCGCTCGACTCGTCCGCCCGCGTCTCGCGCGTGCTGGGCTTTTCCGCCGCGGTGTCGGCCTCGGAGGCGAGCGTGAACCCCACGGCGCAGTTCTTCGTGCCGTCGCGCACGGGCGTGATCCAGCTCGCGACGTCGGGGATGGCGAGCTCGGGCGCCGCTCCCGTCGAGTCCTCCTCGGCCTACATGCGCGCCAGCTCCACGCTGCGCTCCACCGTCAACGACCAGATGAAGACGCTGGAGGAGAAGATCGACGCTATGGAGGCAGAAGTCGGTGGGCAGACCTCGGTTATCTCACGCCAGGAGATCGTGAAGCTCAAGAACAGCCAGGTACGACCATGCAAGCTTTCACTCTTTCGATACTTCAACTTACACCGATATTATATTTATATTCTAACTCTATATTCCGGCATAGTAGTATACACATCACATAGAACTGTACATCTCACTGCTTTGCTCCTGTTCCGCTTTTGTTTGTTTTCTTTCTGTTTCCTCCAGCGCAAGGACACTGCGGGCAAGATGTGGTTCGACCTCCCCGCGACGACGGTGACTCCCGAGATTGCGCGCGACCTGGCGCTGATCAAGGCGCGCTCGGCGATCAACCGCACAGCCTTCATGCGCCGTGACAACTCTGCGACGCCCAAGTACTTCCAGATGGGCACGCTCATCGAGGGCGCGTTCGAGCCGCACAACCGGCTGTCGCGCAAGGATCGCAAGCGCACGCTCGCCGAGGAGATTCTCTCTGACAGCACCACCATGGAGTCGGTCAACGCGCGCGTCGCGCAGTTCTCAGAGCGCAGCAAACGCACCGACAAGAACAAGAGCTACCGCCGCTGA
PROTEIN sequence
Length: 368
MSSGRAAASKAVTSSKACTARSSVSDDDASAASDAEAATTDAASDSEADSDFGGDAEDDIDLDALVSKAASRLSALASATAAASATTAASALDSSARVSRVLGFSAAVSASEASVNPTAQFFVPSRTGVIQLATSGMASSGAAPVESSSAYMRASSTLRSTVNDQMKTLEEKIDAMEAEVGGQTSVISRQEIVKLKNSQVRPCKLSLFRYFNLHRYYIYILTLYSGIVVYTSHRTVHLTALLLFRFCLFSFCFLQRKDTAGKMWFDLPATTVTPEIARDLALIKARSAINRTAFMRRDNSATPKYFQMGTLIEGAFEPHNRLSRKDRKRTLAEEILSDSTTMESVNARVAQFSERSKRTDKNKSYRR*