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scnpilot_p_inoc_scaffold_21799_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..1942

Top 3 Functional Annotations

Value Algorithm Source
Laminin-like protein lam-2 n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SY91_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 664.0
  • Bit_score: 726
  • Evalue 2.20e-206
Laminin-like protein lam-2 {ECO:0000313|EMBL:CCP40309.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas tr similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 664.0
  • Bit_score: 726
  • Evalue 3.00e-206
putative transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 645.0
  • Bit_score: 696
  • Evalue 5.20e-198

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Taxonomy

Xanthomonas translucens → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1941
GACGGCTGGCTCTCGCAATTGCAGCCCGGCCTGCGCAACAGCGTGCGGCTGCGCGTCGAAGGCGAACGCATGGGCCTGCCGGCGCCGGCGTTGACGCCCTACCTCGTGGGCCTGCTGGTGCTGCTGGGCATGCTCGGCACCTTGCTGGGCATGATGGCCACCTTGCGCGGTACCGGCCTCGCGCTGGAAAGCGCCACCGATCTCGACGCCATCCGCAGCTCGCTGGCCGCGCCGGTGAAGGGCCTGGGCTTCGCCTTCGGCACGTCGATTGCCGGCGTGGCGACCTCGGCGGCGCTGGGCCTGTTGTCGGCGCTGCTGCGGCGCGAACGCGCACTGGCCGTGCAGCAACTGGATGCCGGCATCGCCGCGCACCTCGCGCATCGTTCGCCATCGACGCAGCGCCGCGAAACCTTCCGCCTGCTGCAGGAACAGAACGCGCTGATGCCGGTGCTGGTGGATCGCCTGCAGACGCTGGCCGACACGCTGGAACGCCAGCAGCAGGCCGCGGGCGAACGCCTGCAGGCAGGCCAGCAGGCCTTCCACCAGCGCACCGAAGCGGCCTATACGCAACTGGCTTCCACGCTGCAGCAGGCCTTGCACGACGGCATCGCCCGGCAGGCCAACGCCGTCGGCGCCGCGTTGCAGCCGGTGGTGGACAGCACCATGGCCGGCCTGGCCACGCAATCCGATCGCCTGCACGCCACCATCGAACAAGCCGTGCGCAAGCAGCTCGACGGCCTCGACAGCACCGTGCAAGGCGCGGCTGGCGCGGCCCGCGAAAGCTGGAGCGCCGCCATCGCCGAGCAGCAGCGCGGCAATGCGGCGCTCTCCGACGATCTGCGGCAGGCCCTGCAGCAGTTTGCCGCCACCTTCGAGCAGCGCTCGACCGCGCTGGTGGACGGCGTGGCCGCGCGGCTGGAAGACAGCACGGCCCACACGGCCGAAGCGTGGAACGGCGCGCTCGCGCGCCAGCACGAGGCGCACGATGCGCTGGCGCGGCGCAACGAAGAAGCGTGGGCGTCAGCCTCGGCGGGTTTCGACCAGCGCTCCCGCGCCTTGATCGACAGCCTGCAGCAATCGCACGGCGATCTGCAGTCGGCCTTCGCCGGGCGCAGCGACGCGATGATCCAGTCGCTGCAACGCTCGCACGGCGAATTGCAGGCCGCGCTGGAAGCGCGCGACGCCGCGCGCCTTGCCGAATGGCGCGATGCCTTCGCCGCGCTGACCGGCGAGTTCGGCCAGCGCTGGGAGCAGGGCAGCGAACAGGTGGCCGCGCATCAGCAACAGGTTTGCGCCACGCTGGAAAAGACCGCGCAGGCGATGGGCGAACAGTCGCAGGCGCAGGCGCGCGACACCCTGGCCGAGATTTCGCGGCTGGTCGCCACCGCTTCCGAGGCGCCGCGCGCCGCGGCCGAAGTGGTGGCCGAACTGCGGCAGAAGCTGTCCGACAGCATGGTGCGCGACACCGCCATGCTGGAAGAACGTGGCCGCCTGCTGGAAACCCTGCAGACCCTGCTCGACGCGGTCAACCACGCCTCCACCGAACAGCGCAGTGCCATCGATGCGCTGGTCGCCACCTCGGCCGATCTGCTGGAGCGCGTCGGCAGCCGCTTCAGCGCGCAGGTGGAAAGCGAAGCCGGCCGGCTCGACGCGGCCGCGGCCCACGTCACCGGCAGCGCGGTGGAAGTGGCCAGCCTCGGTGAGGCGTTCGGCGGCGCGGTGCAGTCGTTTGGCCAGTCCACCGCGGCATTGAACGAACGCCTGCAAGGCATCGAGGCGGCGCTGGACAAGTCGCTGGCGCGCAGCGACGAACAGCTCGCCTACTACGTGGCGCAGGCGCGCGAGGTGATCGAGCTGAGCATGCTCTCGCAGAAGCAGATCATCGGCGAGTTGCAGCAGCTCGCCGGCGCGCGCAACGACGCCGAGCCCGCCGGCGCATGA
PROTEIN sequence
Length: 647
DGWLSQLQPGLRNSVRLRVEGERMGLPAPALTPYLVGLLVLLGMLGTLLGMMATLRGTGLALESATDLDAIRSSLAAPVKGLGFAFGTSIAGVATSAALGLLSALLRRERALAVQQLDAGIAAHLAHRSPSTQRRETFRLLQEQNALMPVLVDRLQTLADTLERQQQAAGERLQAGQQAFHQRTEAAYTQLASTLQQALHDGIARQANAVGAALQPVVDSTMAGLATQSDRLHATIEQAVRKQLDGLDSTVQGAAGAARESWSAAIAEQQRGNAALSDDLRQALQQFAATFEQRSTALVDGVAARLEDSTAHTAEAWNGALARQHEAHDALARRNEEAWASASAGFDQRSRALIDSLQQSHGDLQSAFAGRSDAMIQSLQRSHGELQAALEARDAARLAEWRDAFAALTGEFGQRWEQGSEQVAAHQQQVCATLEKTAQAMGEQSQAQARDTLAEISRLVATASEAPRAAAEVVAELRQKLSDSMVRDTAMLEERGRLLETLQTLLDAVNHASTEQRSAIDALVATSADLLERVGSRFSAQVESEAGRLDAAAAHVTGSAVEVASLGEAFGGAVQSFGQSTAALNERLQGIEAALDKSLARSDEQLAYYVAQAREVIELSMLSQKQIIGELQQLAGARNDAEPAGA*