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scnpilot_p_inoc_scaffold_22445_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(484..1947)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: small RNA degrading nuclease 5-like n=2 Tax=Cucumis sativus RepID=UPI0002B48DD5 similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 239.0
  • Bit_score: 185
  • Evalue 1.40e-43
Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 1 {ECO:0000313|EMBL:EOY16567.1}; TaxID=3641 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spe similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 227.0
  • Bit_score: 186
  • Evalue 6.60e-44
small RNA degrading nuclease 5-like similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 239.0
  • Bit_score: 185
  • Evalue 4.30e-44

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Taxonomy

Theobroma cacao → Theobroma → Malvales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1464
ATGCAGAAACTGTTGGGCACCGGCTCCAACAGCCGCCCGCGCTTTTCCTCCCCGCAGGACGCCGCCGAGCCCGCCCAGTCCCCCAGCGGCGCCGTCGCTGAGGCCCTCGCTGCCTCTGTTCCCGCTGTAGAGGAGGAGGAGATTATTGAGGACGCCGGCGAGATGCCTCCCCCGCCCGCGCTGTCGCCCGCGGCCGCAGCGGCGACGGCCGCGCTCGCGCAGTCTGTCGCGGCTTCGGAGCTCTCGTGGTCGGACCCCGCGCTGCTGCGTGCCGTCGATTGCGAGATGGTGCTCTGCGGCGAGGGCTTCTATGCGCTCGCGCGGCTCACGGTTACCGACGGCGCGGGCGCAGTGCTGGTGGACGCGCTGGTTAAGCCGCCGCGTGCCGTGTCCGACTACCTCACGCAGTGGTCCGGCATCACGGCTGAGCTGCTGGCCACGGCCACGGTGACCTTCGACGAGGCGCGCCTGCTGCTGTTGCGCGCCGTGCGCGCGCACCACGTGCTGGTGGGGCACTCGCTCGAGAACGACCTTAAGGCGCTGAAGGTCTCGCACAGCCGCGTCTTGGACACGGGGATCCTGTATCCGCATCCACGCGGCGCGAGTTTCCGCTCCTCGCTTAAGTACCTCGCGCTCAAGCACCTGGGTGCGGCGGTCCAGACCGGAGCGCAGGGCCACGACTCGGTGCAGGACGCGCTCGTCGCACTCGCGCTCGCGCGGCTCAAGCTCAGCCGCGGCGCCGACTACGGTTCGCTCGCGGCCGCGCCCTCGGAGTCGGTGCTGGACATCGTCGCCAAGGTGCAGCACGCGCCGCGCTTTATCGCGCCGTCGTACGTGCTGCGGCGCTACGCCTCCGCGGCCGTGCACGCCATCCCGGCCATGAACGACGAAGAGGCCGTCGACAAGGCCATCCGCGAGATGTCGCAGCAGGTTCCGCCCGTGCCCTCGGCCGCGCCGGGCACGCCGGGCCGCGAGACGCCCGTGAAGCTGGCCGTGCTGTACTTGCCGGGTCCGCTGGCCAAGGTTGAGGCCACCGCGATCGCGGACTCGCACGGCGACGCGGGCGTCATGGCGAGTCTGTCGACCATCTACGGGGCCAACCCCGGCGTGCCGGCCGGCGCGCGCGGCGAGAGCGTCGAGGAGAAGGAGAGGCGCGACCCGTTTATGACGGCGACGACGATGGCGGAGCTGCCGCCTGTGCCGGCCGAGCCCAGCCAGCTGGACGCGCTCGCCGCGGCCGACGCGATGATCAAGCGCATCTGGGACGCCGTCCCGCGCAACACGCTCGTGGCCTTCATCGGCGGCCAGAGCTGCGTGGTGCGCGAGCGCGTCATGAGCAAGCGCGCCGTGGCCATGCGCCGCATCAAGGACGCGCCGGCCAACGCCGTGGAGCAGACGGAGGCGCTCGTCAAGGCCTCGGTGCAGGACAAGAACCAGGGCCTCATGTTCGTCAATATCAAGTGA
PROTEIN sequence
Length: 488
MQKLLGTGSNSRPRFSSPQDAAEPAQSPSGAVAEALAASVPAVEEEEIIEDAGEMPPPPALSPAAAAATAALAQSVAASELSWSDPALLRAVDCEMVLCGEGFYALARLTVTDGAGAVLVDALVKPPRAVSDYLTQWSGITAELLATATVTFDEARLLLLRAVRAHHVLVGHSLENDLKALKVSHSRVLDTGILYPHPRGASFRSSLKYLALKHLGAAVQTGAQGHDSVQDALVALALARLKLSRGADYGSLAAAPSESVLDIVAKVQHAPRFIAPSYVLRRYASAAVHAIPAMNDEEAVDKAIREMSQQVPPVPSAAPGTPGRETPVKLAVLYLPGPLAKVEATAIADSHGDAGVMASLSTIYGANPGVPAGARGESVEEKERRDPFMTATTMAELPPVPAEPSQLDALAAADAMIKRIWDAVPRNTLVAFIGGQSCVVRERVMSKRAVAMRRIKDAPANAVEQTEALVKASVQDKNQGLMFVNIK*