ggKbase home page

scnpilot_p_inoc_scaffold_23415_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1094..2245

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000380501C similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 370.0
  • Bit_score: 532
  • Evalue 3.60e-148
  • rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL70202.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 378.0
  • Bit_score: 365
  • Evalue 8.10e-98
amino-acid-binding periplasmic (PBP) ABC transporter protein similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 382.0
  • Bit_score: 358
  • Evalue 2.00e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGCCGAAATTCAAAAAAATATTCCTTGGATGCATTGCCATCTTTACACTTGGAATTTCATATGCCGATGTCAACGTGGGTGTGATTCTTTCCTTGACGGGCCCCGCGGCTTCTCTTGGAATTCCCGCGCAACAGACCATAGAGATGTGGCCCACAACCATCGGCAACCAAAAACTCAACGTCACCGTGCTGGACGATGCTTCCGACCCGACGGCTGCGACACTGGCCGCACGAAAGCTCGTTACCAAGAACAACGTGGATATTTTGATCGGTCCATCCATCACCGCGACGGCACTTGCCGTGCTGGAGGTGGCGGGAGAAACAAAAACGCCCATGATCACGCTCTCGGGTGGGGGCGCCGTGATCAACCCTCAGGAAGGGCCCAAAAAATGGGCCTATAAATTGCCGCCCTCGGAAGAAATCCAGTTGAATGTCATTTTCAATCGCATGAAAAAGCGGGGAGAAAAGACGCTCACCATCATTGCGGCCAAAGACGGGTATGGCCAGGTTTTCATCGAAGAAGCCAACAAACTCGCACCCACCGTCGGCATTGACATCGTCAGTATCGAGCGTTTTGCCAGCAACGACACTTCGTTCGTCTCGCAGGCACTGAAAATCATGAGCAAGAAACCGGATGCGGTATTCATCGCAGCATCCGGCACACCCGCGGCGCTGCCTCAGCTGGAGCTGAAGAAAATTGGCTATGGCGGCACGCAATACCAAACCCAGGCGGTCGCCAACAACGATTACCTGCGCGTTGGCGGGAAATCGATCGAAGGCACTTTCATGTCGGTCTCTCCTATTCTGGTCGCGGAACAATTGCCGGAAAACAATATCGTCAAGCCGGTCGCGGTCAATTATGTTGAAAAAGTGAAGGCCAAGTATGGTATCGGCGCACTTTCCCTGTTCGGCGGCACCGCCTGGGATGCGCACCTGATACTCAACCACATCGTGCCTTTGGCAATGAAATCAGCCGCCCCGGGCACGCCGGAATTTCGCCTGGCATTGCGCGACACGCTGGAAAACGACATCAAGAATCTGGTCTTGGCGGAAGGCGTATACACGATGTCGCACACCAACCACAACGGTGCGGACGAGCGCAGCCAGGTACTGGTCGAAGTCAAAAACGGCAAGTGGAAGTTTGTCGACTGA
PROTEIN sequence
Length: 384
MPKFKKIFLGCIAIFTLGISYADVNVGVILSLTGPAASLGIPAQQTIEMWPTTIGNQKLNVTVLDDASDPTAATLAARKLVTKNNVDILIGPSITATALAVLEVAGETKTPMITLSGGGAVINPQEGPKKWAYKLPPSEEIQLNVIFNRMKKRGEKTLTIIAAKDGYGQVFIEEANKLAPTVGIDIVSIERFASNDTSFVSQALKIMSKKPDAVFIAASGTPAALPQLELKKIGYGGTQYQTQAVANNDYLRVGGKSIEGTFMSVSPILVAEQLPENNIVKPVAVNYVEKVKAKYGIGALSLFGGTAWDAHLILNHIVPLAMKSAAPGTPEFRLALRDTLENDIKNLVLAEGVYTMSHTNHNGADERSQVLVEVKNGKWKFVD*