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scnpilot_p_inoc_scaffold_24454_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..1020

Top 3 Functional Annotations

Value Algorithm Source
transposase Tn21 n=1 Tax=Pseudomonas syringae RepID=UPI0002E98446 similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 293.0
  • Bit_score: 577
  • Evalue 8.50e-162
Transposase {ECO:0000313|EMBL:ETK20488.1}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 293.0
  • Bit_score: 577
  • Evalue 1.20e-161
tnpA; transposase TnpA similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 293.0
  • Bit_score: 575
  • Evalue 1.20e-161

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Taxonomy

Pseudomonas sp. FH1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
AAGATTGCCCGCGAGGGCGGCCAGATGACGCCCGCCGACCTGGCCAAGTTCGAGGCGCCGCGCCGCTACGCGACCCTGGTCGCGCTTGCCATCGAGGGTATGGCCACCGTCACCGACGACGAAATCATTGACCTGCACGACCCGAAATACGGCAGCAGTCCTGGGCGGACTTTCTATACCCACATCTCCGACCAGTACGCGCCATTCCACACCAAAGTGGTCAATGTCGGCGTGCGCGACTCGACCTATGTGCTCGACGGCTTGCTGTACCACGAGTCCGACCTGCGCATCGAGGAGCACTACACCGATACGGCAGGATTCACCGATCATGTATTTGGCCTGATGCACCTGCTGGGCTTCCGCTTTGCGCCGCGCATCCGCGACCTGGGCGACACCAAGCTGTTCATCCCCAAGGGCGACACTGTCTACGACGCGCTCAAGCCGATGATTAGCAGCGACAGACTGAACATCAAGGCTATTCGCGCCCATTGGGATGAAATTCTACGGCTGGCCACGTCGATCAAGCAGGGCACGGTGACGGCCTCGCTGATGCTCAGGAAGCTTGGCAGCTACCCGCGCCAGAACGGCCTGGCCGTCGCCCTGCGCGAGTTGGGACGCATCGAGCGCACGCTGTTCATCCTGGACTGGCTGCAAAGCGTCGAGCTGCGCCGCCGCGTGCATGCCGGGCTGAACAAAGGCGAGGCGCGCAACGCGCTGGCCCGCGCCGTGTTCTTCAACCGCCTGGGGGAAATCCGCGACCGCAGCTTCGAGCAGCAGCGCTACCGAGCCAGCGGCCTCAACTTGGTCACGGCCGCCATCGTGCTGTGGAACACGGTCTATCTGGAGCGGGCCGCGAACGCCTTACGTGGCCACGCTCAAGCCGTCGATGACGGCCTGTTGCAGTACCTGTCGCCGCTCGGCTGGGAGCACATCAACCTGACCGGCGATTACCTCTGGCGCAGCAGTGCCAAGATCGGCGCGGGAAAATTCAGGCCATTGCGACCGCTGTCCCCGACTTAA
PROTEIN sequence
Length: 340
KIAREGGQMTPADLAKFEAPRRYATLVALAIEGMATVTDDEIIDLHDPKYGSSPGRTFYTHISDQYAPFHTKVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFGLMHLLGFRFAPRIRDLGDTKLFIPKGDTVYDALKPMISSDRLNIKAIRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERAANALRGHAQAVDDGLLQYLSPLGWEHINLTGDYLWRSSAKIGAGKFRPLRPLSPT*