ggKbase home page

scnpilot_p_inoc_scaffold_24574_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(526..1041)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00037E240E similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 174.0
  • Bit_score: 148
  • Evalue 5.00e-33
lipoprotein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 173.0
  • Bit_score: 146
  • Evalue 5.30e-33
Putative lipoprotein {ECO:0000313|EMBL:CCJ08372.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (stra similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 173.0
  • Bit_score: 146
  • Evalue 2.60e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylocystis sp. SC2 → Methylocystis → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGAGGATCGGAATTGTCGCGGCGACCGCTCTGGTCGGCGCCATAACGGCTGGTTGCGTCGACCGCAAACCGGCGACCGTGGCCTTCTCTATCGAGGAGGCCGCCTTCATCAAGAAGACCGGCACGGGCGTGATCGTCGGCCATGCCTTCCGCACCAAGCCGAGCGGCGTGGTGGTCAATGCCGCCGGGCAGGTCGTGCGCCTGATCCCATCGACCGCCTTCGCCCGCGAACGCTTCGCCAATTTCTACGGCAAGGGCAAATACGTGCCCCACAGCGGCTATCCGCGCGAGGACGAGGTCGATCCCGCCTATTCCGAATACATCCGCACGACCAAGGCCGAGGCCAATGGCCGCTTCGCCTTCGACAAGGTCGCGCCGGGCAGCTATTTCCTGACCACGCAGGTGATCTGGGGCGAGGAGACGGCCTTCACCCGCGAGGGCGGCTCGGTCTATGACAGCGTCACGCTGACGGGCAAGGAAACCGAGCCCGTCCAGGTCATCCTCTCCGGCAACTGA
PROTEIN sequence
Length: 172
MRIGIVAATALVGAITAGCVDRKPATVAFSIEEAAFIKKTGTGVIVGHAFRTKPSGVVVNAAGQVVRLIPSTAFARERFANFYGKGKYVPHSGYPREDEVDPAYSEYIRTTKAEANGRFAFDKVAPGSYFLTTQVIWGEETAFTREGGSVYDSVTLTGKETEPVQVILSGN*