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scnpilot_p_inoc_scaffold_24744_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(197..1099)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037FCCD4 similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 300.0
  • Bit_score: 571
  • Evalue 5.40e-160
  • rbh
Low density lipoprotein receptor {ECO:0000313|EMBL:GAJ30346.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomon similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 300.0
  • Bit_score: 406
  • Evalue 3.20e-110
low-density liporeceptor repeat class B family protein similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 300.0
  • Bit_score: 268
  • Evalue 2.10e-69

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Taxonomy

Acidomonas methanolica → Acidomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGAACGAATACACGGCTGCGCAGGGCCGTCTGGCCCTGCTGGATGTCTACAAGCGGCAGTTGGTGGTGATTGAGCGTGAGAGCGGCAAGATCCTCCTGACGGTGGAGAATGTCGGCCACCCCGACGGTATCCAGGTCGATGCGGCAAAAGGTTATTTCTACTGGACCGACATGGGCCCCCATCGCGAAGGCGAGGACTTCTTCGAGCCGGACGGCACCATCCGGCGCTGCCGCCTCGACGGCACTGGCGATACCCAGCTGGTCGGCGACGGCGCGATCTACACGCCCAAGCAGCTCCAATTGGATCATGACGCCGGCATGCTCTACTGGTGCGACCGCGAAGGCGGCCGGGTCATGCGCAGCAGGGTCGACGGGAGCGGGCTGGAAACGCTGGTGGAGCGGGGCAGGGGAGGCGCCTATCCCCGCGACAAGCTCGACCAATGTGTCGGCATCGCGCTCGATGCCGCGCACGGCAAGCTCTACTGGACCCAGAAGGGGCCCAAGAAAGCAGGTCTCGGCCGTATCTTCCGCGCCGGCATTGAGCTTGCCCAAGGTGAGCAGCCCTGGAACCGGTCCGACATCGAGCTGCTCGTGGACGCGCTTCCTGAACCCATCGATCTCGAAATCGACGAGGAACGGGGCCTGCTCTACTGGACCGATCGCGGCGCTGAGCCCGATGGCAACTCCTTGAACCGCGCCCGCATCACGGCTACCGGCCTGGAAGGGCACGAGGTTCTGGTTCGCGGCTTTGAGGAAACGATCGGCCTGACGCTCTGCCCTGGTGACAATGTCGCCTATGTGTCGGACCTGTCGGGCCGCGTCTATCGCATCGACCTTGAGACCATGGAACGGACGGTGCTGTACGACCAGGGTCAGGCGGTAACCGGCCTCGTGCTCTTCTGA
PROTEIN sequence
Length: 301
MNEYTAAQGRLALLDVYKRQLVVIERESGKILLTVENVGHPDGIQVDAAKGYFYWTDMGPHREGEDFFEPDGTIRRCRLDGTGDTQLVGDGAIYTPKQLQLDHDAGMLYWCDREGGRVMRSRVDGSGLETLVERGRGGAYPRDKLDQCVGIALDAAHGKLYWTQKGPKKAGLGRIFRAGIELAQGEQPWNRSDIELLVDALPEPIDLEIDEERGLLYWTDRGAEPDGNSLNRARITATGLEGHEVLVRGFEETIGLTLCPGDNVAYVSDLSGRVYRIDLETMERTVLYDQGQAVTGLVLF*