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scnpilot_p_inoc_scaffold_26720_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1996..2259

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer ATPase TrbB n=1 Tax=Pseudomonas aeruginosa BL08 RepID=U8KML4_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 88.0
  • Bit_score: 167
  • Evalue 6.90e-39
Conjugal transfer protein TrbB {ECO:0000313|EMBL:KIZ32697.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas st similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 172
  • Evalue 2.30e-40
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 88.0
  • Bit_score: 168
  • Evalue 1.10e-39

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Taxonomy

Pseudomonas stutzeri → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
TTGCCGCCAGCCGCGCCCGGCCCGGCCTTCGCGCTGCGCAAGCGTGCCGTGAACATCATCGGCCTGGATCAGTATGTGGCCGACGGCATCCTGACCGCCTGCCAGGCGGACTTCCTGCGCCGCGCCGTGCGCGAGCGCCAGAACGTACTGATCGCCGGCGGCACCAGTACCGGCAAGACCACCCTCGCCAACGCCTTGCTGGCCGAGATCGCCGCCACCGGCGACCGCGTGCTGGTGCTCGAAGACACCATCGAGCTGCAATGC
PROTEIN sequence
Length: 88
LPPAAPGPAFALRKRAVNIIGLDQYVADGILTACQADFLRRAVRERQNVLIAGGTSTGKTTLANALLAEIAATGDRVLVLEDTIELQC