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scnpilot_p_inoc_scaffold_25423_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..700)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=2 Tax=Alcaligenes RepID=M5J103_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 233.0
  • Bit_score: 321
  • Evalue 9.90e-85
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI34705.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD- similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 233.0
  • Bit_score: 321
  • Evalue 1.40e-84
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 226.0
  • Bit_score: 318
  • Evalue 1.80e-84
  • rbh

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Taxonomy

Alcaligenes sp. EGD-AK7 → Alcaligenes → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGTGGCAGATCCCCGACATCATCTGCCCTTCGAGACCGCCTCGCGTCCGGTGACCGGTCTGGCGGTGGAATATCCGCGTGGACACGTCATCGCCACGCACAAGCACAAGCGCTCGCAGTTTCTGTACGCCACGCAAGGCGTGATGGTGATTGGTACCAGTCGCGGACGCTGGGTAGTCCCACCTACGCGCGGCGTCTGGCTGCAGGCGCATGTAGAACACACCGTCCGCATGCGTGGGCCGGTCAGCATGCGAACCTTGTTCGTGGACCAGGATGCCGCGCCGCATTTACCAACAGAGAACTGCGTCGTCAGCGTGTCACCCATGTTGCGCGAGCTGGTACTGGAAGCCTCGCGGATACCGATGGATTACGACCTTGACAGCCGCAATGGACGCCTCATGCGCCTGCTGCTCGACGAGATTCAGGCGCTCCCAGTCTTGCCTTTTCATCTGCCGTGGCCGGAAGACAAACGTCTGAGTCAGGTTTGCACGCAACTGGCGCAGCAGCCGGATGTGTCCGCAACAGTCATTGAGTGGGCGGAGCGGCTAGCCATGAGCCAGAAGACGTTTCATCGCCAGTTCAAGCACCACACGGGCATCACCTTCGGACAATGGCGTCAATTGGCACGCCTGCTGTTGTCACTGGAAAGTCTGGCCGAAGGCACGCCGATCGTGCAGGTTGCGCTTGAACATGGCTAC
PROTEIN sequence
Length: 233
MVADPRHHLPFETASRPVTGLAVEYPRGHVIATHKHKRSQFLYATQGVMVIGTSRGRWVVPPTRGVWLQAHVEHTVRMRGPVSMRTLFVDQDAAPHLPTENCVVSVSPMLRELVLEASRIPMDYDLDSRNGRLMRLLLDEIQALPVLPFHLPWPEDKRLSQVCTQLAQQPDVSATVIEWAERLAMSQKTFHRQFKHHTGITFGQWRQLARLLLSLESLAEGTPIVQVALEHGY