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scnpilot_p_inoc_scaffold_28753_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 557..856

Top 3 Functional Annotations

Value Algorithm Source
Plasmid stabilization system n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6ATS0_RHILS similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 98.0
  • Bit_score: 139
  • Evalue 1.30e-30
Plasmid stabilization system protein {ECO:0000313|EMBL:EYR79541.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 203
  • Evalue 1.80e-49
plasmid stabilization protein similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 96.0
  • Bit_score: 139
  • Evalue 4.90e-31

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
GTGAAGGTCGTTATTGCCGCCGAGGCCGTGTCAGACCTCGAACATATCGGTGACTACATCGCCGCCGATAATCCGGTGCGTGCCGAAAGTTTCGTGCGCGAGTTGCTGGCAAGGTGCCATGCCCTCGCCCACATGCCCCGCGCCTTCCCGCTGGTGCCACGCTACGAACATACCGGCGTGCGCCGCCGCCCCCATGGCGATTACCTGATTTTCTACCGCGTCGGCGCCGACGTGGTGGACATTCTGCACGTCCTCAATGGCGCCCAGAACTACGAAGCCATCCTGTTCCCCGACGATTAA
PROTEIN sequence
Length: 100
VKVVIAAEAVSDLEHIGDYIAADNPVRAESFVRELLARCHALAHMPRAFPLVPRYEHTGVRRRPHGDYLIFYRVGADVVDILHVLNGAQNYEAILFPDD*