ggKbase home page

scnpilot_p_inoc_scaffold_26093_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1370..2305)

Top 3 Functional Annotations

Value Algorithm Source
int; tyrosine-based site-specific recombinase CMGI-2 id=12497985 bin=THIO_MID species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 312.0
  • Bit_score: 637
  • Evalue 8.30e-180
Integrase {ECO:0000313|EMBL:ETD47993.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07. similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 311.0
  • Bit_score: 637
  • Evalue 1.20e-179
int; tyrosine-based site-specific recombinase CMGI-2 similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 311.0
  • Bit_score: 631
  • Evalue 1.70e-178

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
GGCGCCAAGGCCGAGGCGCGCAAGGCGCCCACGATGGCCGAGTTGTGCAAGAAGTTCATGGAGGACTACTCCAAGAAGCGCAACAAGCCCAGCACGCAGGACGGCTATCAGGGCGTCATCGACCGCAACATCATCCCGCTGCTGGGCCGCAAGAAGGTGCATGACGTGAAGCGGCCCGACATTGCTGCACTGATGGAGAAGCTGGCCTACAAGCCGACCGAGGCGAACAAGACCTTCGGCGTGCTGCGCAAGATGTTCAACCTGGCCGAAGTGTGGGGCTACCGCTCGGACGGCACGAATCCGTGCCGCCACGTCCCGATGTACCCGCCGGGCAAGGAAACCCGGCTCATCGTGGACGAGGAAATGGTGCGGATCTTCCGCCATCTGGAGAAGCTGGAGGCGGAAGGGCTGGAGAACTACGTCATTCCGTTGGCTATCCGGCTGCAATTCGAGTTTGCCGCACGGCGCTCCGAAATCTGCCCGCTCCAATGGAGCTGGCTGGACTTCGAGAACCGGCGCGTGGTGTGGCCCGACAGCAAGGTCGGCGGCATTTCCAAGCCCATGAGCGAGGAAGCGTATCGGCTGCTTTCGACGGCACCGCGTCGGGAGGGCTGCCCCTATGTCCTGCCATCGCCCAATGACCCGACCAAACACCTGACTTTTGGCGAGCACTATGGCGGCTGGTGCCGGGTGCTCAAGGCCGCCGGCGTCCCGCACGTCGGCACGCACGGCATCCGCCATCGCTCGACCACCGACATTGCCAATTCGGGCGTGCCGACCAAAGTGGGCATGAAGTTAACGGGCCACAAGACCGTAGCGATGTTCATGCACTACGTCCACACCGAAGACAAGCCGGTGCGCGATGCGGCCGAGCTGGTGGCCAGCCGGCGCCAGGCTATCACGGGCACGCGGCAGCTTGCGGAGGCGACGGCATGA
PROTEIN sequence
Length: 312
GAKAEARKAPTMAELCKKFMEDYSKKRNKPSTQDGYQGVIDRNIIPLLGRKKVHDVKRPDIAALMEKLAYKPTEANKTFGVLRKMFNLAEVWGYRSDGTNPCRHVPMYPPGKETRLIVDEEMVRIFRHLEKLEAEGLENYVIPLAIRLQFEFAARRSEICPLQWSWLDFENRRVVWPDSKVGGISKPMSEEAYRLLSTAPRREGCPYVLPSPNDPTKHLTFGEHYGGWCRVLKAAGVPHVGTHGIRHRSTTDIANSGVPTKVGMKLTGHKTVAMFMHYVHTEDKPVRDAAELVASRRQAITGTRQLAEATA*