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scnpilot_p_inoc_scaffold_24122_7

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2121..2447)

Top 3 Functional Annotations

Value Algorithm Source
Agrobacteirum virulence protein VirD4 n=1 Tax=Rhizobium sp. RepID=L0NMS8_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 108.0
  • Bit_score: 218
  • Evalue 2.50e-54
Agrobacteirum virulence protein VirD4 {ECO:0000313|EMBL:CCF22403.1}; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 108.0
  • Bit_score: 218
  • Evalue 3.40e-54
traG; Type IV secretion system-coupling protein virD4 similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 108.0
  • Bit_score: 173
  • Evalue 4.40e-41

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Taxonomy

Rhizobium sp. NT-26 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
GGCGCGAAGGCCGGCACCTTCCTCTCCAACGCCGGCGTCCTTCAGGTCTCCGGCGTCAACGATAATGACACCGCCAAATTCGTCTCCGACATGCTCGGCCAGACAACTGCCGTGTTCCAAACCATGGGCCGCGCCCTCGATTCCGAAAAATCCGGCGTCTCCTATGGCGAACAGCACAGCGCGCGGCCGCTGATGACTCCTGACGAAGTGCGCAACTTCCCCCAGAACGGAGAACTGCTGTTCATCGCCGGCAAGCGGCCAATCATGGCCAACAAGCTCGTCTACTATGCCGATCCGGAATTCAAAGGGCTGTTCGATCCGGCGTGA
PROTEIN sequence
Length: 109
GAKAGTFLSNAGVLQVSGVNDNDTAKFVSDMLGQTTAVFQTMGRALDSEKSGVSYGEQHSARPLMTPDEVRNFPQNGELLFIAGKRPIMANKLVYYADPEFKGLFDPA*