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scnpilot_p_inoc_scaffold_24185_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(640..1353)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI00035D2AAE similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 102.0
  • Bit_score: 134
  • Evalue 1.80e-28
Sigma factor SigB regulation protein RsbQ {ECO:0000313|EMBL:KJL45719.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium gins similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 101.0
  • Bit_score: 175
  • Evalue 9.60e-41
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 103.0
  • Bit_score: 130
  • Evalue 5.50e-28

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGGTGCTGCCCGCCCCGGCCGGGACCCCCGGGGCGCCGACGGTGGTGTTCGAGGCGGGATGGGCGGCGACCCGCTCCACCTGGGCGTTGGTGCAGACCCGGGTCGCCGCGTTCACGCGGGCCGTGGTGTATGACCGGGCAGGGCTGGGCCGGTCCGCCCCGGATAGTGCAGGGCGCACCCTGGACCGGATGGCCGACGACCTGAACGATTTGCTGGACGGCCTCGAGCCGAGCAGCGGGTTCGTGCAGGTGGGGCATTCCGCGGGCGGCCCGATCGTGCGGCAGGCAGCAGACCGGCCGCCGGGACCGGGAGGCCGGTCTGGTGCTGGTGGATCCGACCGACGAGGCAGCGACCCAGCAGTTCGGTGTGCCGTTCCGGGTCGGGGAGAAGATCGTGATCGCCGTGGAGTGGGTGCTGGCACGGGTGGGGTTGCTGGAGCGGTTCTTCCGGTTCCTCGGGGAGGGGATGCCCGAGGATGTGCGGGCGGATCTTCACCGGGAGGCGTTCCGGCCCGCGGTGGTGGTCACCCAGGGTCGGCAGGCGCGCACGTTCCTCACCGAGCTGCACGCCTGGCGCGGCGACCCGGATGCCGCGACGGGTCCGGGATGCCGCGACCGCCGCCGGGCGGTATCGGGCCGCACAGTCCCGGCAGGGCCGGCACGTGGTCGCTGCCCGCTCCGGCCACTACATCCCCGCCACAGAATCGGACCTGA
PROTEIN sequence
Length: 238
MVLPAPAGTPGAPTVVFEAGWAATRSTWALVQTRVAAFTRAVVYDRAGLGRSAPDSAGRTLDRMADDLNDLLDGLEPSSGFVQVGHSAGGPIVRQAADRPPGPGGRSGAGGSDRRGSDPAVRCAVPGRGEDRDRRGVGAGTGGVAGAVLPVPRGGDARGCAGGSSPGGVPARGGGHPGSAGAHVPHRAARLARRPGCRDGSGMPRPPPGGIGPHSPGRAGTWSLPAPATTSPPQNRT*