ggKbase home page

scnpilot_p_inoc_scaffold_24248_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1961..2437

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC976 similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 162.0
  • Bit_score: 202
  • Evalue 3.50e-49
membrane protein similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 160.0
  • Bit_score: 198
  • Evalue 1.10e-48
Membrane protein {ECO:0000313|EMBL:AJP73233.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 160.0
  • Bit_score: 198
  • Evalue 5.40e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGCGGACGGCTTTGGTACTTGGTGCGAGCGGCGGGATTGGTGGTGAAACGGCCCGAGCGCTAGTTACGCATGGCTGGCAGGTCCGCGGCCTGAGCCGCACCCCGAGGCAGCACGGAGTTATCGACTGGCGGATCGGCGATGCACTGGACATTGCAGCCGTTCTCGCAGCGGCCAAGGGTGTTGAGGTCATCGTACATGCCGTGAACCCACCGGGGTACCGCGACTGGGACAGGCTGGTCATGCCGATGCTCAAGAACAGCATCGAGGCGGCCCTTACAAATGAAGCGCGCCTGGCGCTGCCAGGCACGATCTACAATTACGATCCGTCCGAGGAGCCCCTTGCCGACCCGGAAACGCCACAGCATCCCCGCACGCACAAGGGCGCGATCCGCAAGGCGATGGAGGAGTGCATGGAAACGACGCTAGGCCTGCGATCACTCGTACTGCGCGCTGGCGACTTCTTCGGACCCCGCCCC
PROTEIN sequence
Length: 159
MRTALVLGASGGIGGETARALVTHGWQVRGLSRTPRQHGVIDWRIGDALDIAAVLAAAKGVEVIVHAVNPPGYRDWDRLVMPMLKNSIEAALTNEARLALPGTIYNYDPSEEPLADPETPQHPRTHKGAIRKAMEECMETTLGLRSLVLRAGDFFGPRP