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scnpilot_p_inoc_scaffold_27230_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..385)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein n=1 Tax=Variovorax paradoxus RepID=UPI00035C3BB9 similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 128.0
  • Bit_score: 206
  • Evalue 1.90e-50
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EJL68888.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 131.0
  • Bit_score: 185
  • Evalue 5.00e-44
methyl-accepting chemotaxis sensory transducer similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 132.0
  • Bit_score: 165
  • Evalue 1.40e-38

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
GTGAGCTCGATCGCCGACAAGTTCAAGAAATTACTGCCCGCCAACAGCGGCAACGACAAGGCCCCCGTCGACGGCTCCGGTGCGATATCGCTCGACGATGTCGACACGGTTCAGGTTCCGGACGAAAAGACCGTGAAGCTCGCCAGGAAGAGCGGCGCGGCCGACACCAGCTTCGGCGATGTCGACCTGCCCGGCGGCGGTGACGCCGCCAACGAGCCCGGCGCCGCCGCGCTCGACGCCGTGCCCGACACCGCGGGCGGCCGCGTGGGCGCCGCCCCCGCCAAGCAGCAGCGCATCCTGGCGATCATGCTGGCGGTCGTGGTGCTGTTGCTGCTGCTGGTGGCCGGCTCCGCCATTCTTCGCGCCGAACGCCTCGCGCAGCAG
PROTEIN sequence
Length: 128
VSSIADKFKKLLPANSGNDKAPVDGSGAISLDDVDTVQVPDEKTVKLARKSGAADTSFGDVDLPGGGDAANEPGAAALDAVPDTAGGRVGAAPAKQQRILAIMLAVVVLLLLLVAGSAILRAERLAQQ