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scnpilot_p_inoc_scaffold_26494_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1136..1618)

Top 3 Functional Annotations

Value Algorithm Source
ispA; geranylgeranyl pyrophosphate synthase (EC:2.5.1.10) similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 160.0
  • Bit_score: 116
  • Evalue 9.40e-24
farnesyl-diphosphate synthase n=1 Tax=Ponticaulis koreensis RepID=UPI0003B341C7 similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 159.0
  • Bit_score: 113
  • Evalue 1.70e-22
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:KJB96853.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanel similarity UNIPROT
DB: UniProtKB
  • Identity: 39.1
  • Coverage: 161.0
  • Bit_score: 117
  • Evalue 2.10e-23

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGGGTCCGTCTACGCGGGCGAATGTAATTGCTATGTTAACCAGGAAAGCTGGTCCCCAAGGTATGGTGGCTGGTCAAATGTTTGATTTATTTCCTATACAAACACGAGATATTGACAGTATTTTGCGCATGCAGCAGCTAAAGACAGGGTGTCTGATTGCTGCAAGCTGTCAGGCTGCTGCTATTGTTGCTGGTGCGTCTCCTTCGGAAGTAAGTTTTCTCGAAAAATTTGGTCATTTGTTTGGGCTGATTTTCCAGATTACTGATGATTTACTGGATATAGAAGGGGAGGCAAATCTGACAGGTAAGCCAATTGATCAGGACATAAACAAAAATAACCTAATCAACCTTTTAGGTGTAGAAGATACCAAGGAATTATTGGCGAAACTGGTAAATGATGCAATTCATTTGTTAGAACAGCTTCCACATGGCGGTGGAATGCTTCAGGCTCTTATTCCCTGGGTGTTGGATCGTCAGAATTAG
PROTEIN sequence
Length: 161
MGPSTRANVIAMLTRKAGPQGMVAGQMFDLFPIQTRDIDSILRMQQLKTGCLIAASCQAAAIVAGASPSEVSFLEKFGHLFGLIFQITDDLLDIEGEANLTGKPIDQDINKNNLINLLGVEDTKELLAKLVNDAIHLLEQLPHGGGMLQALIPWVLDRQN*