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scnpilot_p_inoc_scaffold_29105_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1872..2111

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QTQ7_METTR similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 80.0
  • Bit_score: 118
  • Evalue 3.30e-24
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.; similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 80.0
  • Bit_score: 131
  • Evalue 4.10e-28
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 80.0
  • Bit_score: 114
  • Evalue 1.00e-23

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGTCTCGTATCGGTAAGAAGCCGGTTTCGGTTCCCGCGGGCGTCACCGCCCCGGTCACCGGCCAGCTGGTCAAGATCAAGGGCTCCAAGGGCGAGCTCTCCTTCGAGGTTCCCGAGGACGTCTCGGTCGCCTTGGAGGACGGCGCGATCGCGGTTCAGCCGCGTTCGCAGTCGAAGCGCGCCCGTGCGCTCTGGGGCACCTCGCGCGCCCGCATCAACAATCTCGTCATCGCCACCACC
PROTEIN sequence
Length: 80
MSRIGKKPVSVPAGVTAPVTGQLVKIKGSKGELSFEVPEDVSVALEDGAIAVQPRSQSKRARALWGTSRARINNLVIATT