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scnpilot_p_inoc_scaffold_29182_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1844..2146)

Top 3 Functional Annotations

Value Algorithm Source
large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel id=12495606 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 169
  • Evalue 2.10e-39
mscL; large conductance mechanosensitive channel protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 89.0
  • Bit_score: 159
  • Evalue 2.30e-36
large-conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 87.0
  • Bit_score: 132
  • Evalue 7.90e-29

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGAGATCGCGTTTCATCGAAAAACAGGGGGAAAACATGTTTTCCAACCTGTTCCTGCCGCTGAAGAGCGTGCCGGAAGGCGTGGCGATGACGCTGGTGGAAGTGAAGAAAGCCGGGGTGCCGGTATTCGCCTACGGCAGCTTCCTGACCATCCTGCTGAATTTCATCATCCTGGCGTTCATCGTCTTCGTTCTCGTCAAGCAGATCAACCGGCTGAAGAAGGAAGCGCCGCCTGCTCCCCCCGCCGCCACGCCGGAGGACATCGTGCTGCTGCGCGAGATTCGCGACAGCCTGAAAAAGTAG
PROTEIN sequence
Length: 101
MRSRFIEKQGENMFSNLFLPLKSVPEGVAMTLVEVKKAGVPVFAYGSFLTILLNFIILAFIVFVLVKQINRLKKEAPPAPPAATPEDIVLLREIRDSLKK*