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scnpilot_p_inoc_scaffold_29257_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1467..1676)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380A540 similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 69.0
  • Bit_score: 108
  • Evalue 2.30e-21
DNA-binding transcriptional repressor {ECO:0000313|EMBL:CDX31794.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 69.0
  • Bit_score: 123
  • Evalue 1.30e-25
cspA1; cold shock protein CspA similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 69.0
  • Bit_score: 111
  • Evalue 1.30e-22

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Taxonomy

Mesorhizobium sp. ORS3359 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGGCTACCGGAACAGTGAAGTTCTTCAATACGACCAAGGGTTTTGGCTTCATCGAGCAGGGCGGCGGCCAGCCGGACGTGTTCGTGCATGCCACCGCTGTTGAGCGTGCCGGCATGCGCAGCCTCGTCGAGGGTCAGAAGATCAACTTCGACCTCGTGCGGGACGCCCGCTCCGGCAAGCAGGCCGCCGAGAATCTCAGCGCCGCCTGA
PROTEIN sequence
Length: 70
MATGTVKFFNTTKGFGFIEQGGGQPDVFVHATAVERAGMRSLVEGQKINFDLVRDARSGKQAAENLSAA*