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scnpilot_p_inoc_scaffold_29779_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(983..1696)

Top 3 Functional Annotations

Value Algorithm Source
Protein traI {ECO:0000313|EMBL:CCP17148.1}; EC=3.6.1.- {ECO:0000313|EMBL:CCP17148.1};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotro similarity UNIPROT
DB: UniProtKB
  • Identity: 36.6
  • Coverage: 243.0
  • Bit_score: 115
  • Evalue 1.20e-22
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346991E similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 200.0
  • Bit_score: 359
  • Evalue 2.60e-96
traA; conjugal transfer protein TraA similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 219.0
  • Bit_score: 113
  • Evalue 6.90e-23

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCTGACGATCCGAGCACTCAAAACCCAAAGCGGAAGCAAGGCCGGAAGCGGCATCCCGGAATATCTCACCGCCACGCACTATTACCAAGACAAAGAGGGTAAGGAAGTCGTCGCGTCAGCGTGGTTCGGCACCGGTGCCCAGGCCCTTGGCCTGCATCGCAAGGCCGTGGACGTCGAAGACATGGCGAAGCTGGCTCAAGGTCTCGCGCCAGATGGCACGAAGCTCCGCCGCAATGCAGGCGAGAAGCCGGCAACCATCGAGCTGAAGGATCGCCAGGGGAACCCTCGACTTGATGAGGATGGCAATCCGCTCAAACGTGAGGTCGCACAGCGGATCGGCTGGGACATGACTTTCTCAGCGCCCAAGACTGTCAGTGTGGCGTTTGCCGCCGCACAGGGCGAACTGCGCGACCAGATCCTGGAAGCCCACCATCGGGCTGTGGCGAAGAGCCTGGACTGGATCGAGAAGCAAGCCGCAGAGACGCGCCGAGGCAAGGCCGGGAAGGACGTCCTTGACGCGGGGATGGTCATCTCACGCCACACGCATTTCGCCGCCCGTCCCCACGATCAGACGTTCGACGGCAGCGAAAGCCAGTGCGCGTGCGGCAGCGACGCGATCGGCGTCGTCAGGATGTCCCACGGGTTGCGCATGCCGGCGCTCGCGAACGCGTCGTCCGCACTGGCAGCGCTGTGTACGCCGCCGACCGTGTAG
PROTEIN sequence
Length: 238
MLTIRALKTQSGSKAGSGIPEYLTATHYYQDKEGKEVVASAWFGTGAQALGLHRKAVDVEDMAKLAQGLAPDGTKLRRNAGEKPATIELKDRQGNPRLDEDGNPLKREVAQRIGWDMTFSAPKTVSVAFAAAQGELRDQILEAHHRAVAKSLDWIEKQAAETRRGKAGKDVLDAGMVISRHTHFAARPHDQTFDGSESQCACGSDAIGVVRMSHGLRMPALANASSALAALCTPPTV*