ggKbase home page

scnpilot_p_inoc_scaffold_28122_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..718)

Top 3 Functional Annotations

Value Algorithm Source
Conjugative relaxase domain protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTX3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 218.0
  • Bit_score: 171
  • Evalue 7.60e-40
conjugative relaxase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 218.0
  • Bit_score: 171
  • Evalue 2.20e-40
Conjugative relaxase domain protein {ECO:0000313|EMBL:AEM46725.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 218.0
  • Bit_score: 171
  • Evalue 1.10e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidithiobacillus ferrivorans → Acidithiobacillus → Acidithiobacillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGCTTTCCGTCGCGTCGCTCGCCGCCGGTCGAGGCCCGGGATACTACCTCGAGCTGTGCAACCTGAACTACTACGCCGAGGGGGGCGAGCCGCCGCCCGTCTACCACGGCGCGGCCGCCCGGGAGATGGGCCTGTCGGGCGTCGAGCACGACCGCCGGGTCATCGAGCGGCTTTGCGCCGGATACCACCCCGAGACGGGCGAGGCGCTGGTCCGGAACGCCGGGAAGGAAGGCCGGTACGTGGGCGAGGACTGCACGTTCTCGGCGCCCAAGACGGTCTCGCTCGCCTTCGCCATGGCCGACGACCCGCTCCGCGACGCCATCCGGACCAAGCACCTCTCGGCGGTCAAGCAGGCCCTCGATTTTTTGGAGGCCGAGGCCGGCTTCGCCCGCGTCGGAGCCCAGGGCCAGCGGCTCGCGAAGGTCCCGCTGCTCTTCGCCCTGTTCGAGCACGCCACCTCGCGGGCCATGGACCCGCAGCTCCACACCCACGCCCTGCTCATCAACCTCACCAGGCACCCCGACGGGCGGTACACCGCCATCGACCCGTCGCACGTCTACAAGTTCCAGATGGCCGCCGGTGCGATCTACCGCGTGGCCCTGGCCCGGGGAATGCAGCAGCTCGGGTTCGAGGTCGAGCGGCGGCAGGTGGGCTCGTCCATCGGGTTCGAAATCGCCGGGATGCCGAAAGCCCTGGTCGACGAGTTCAGCAAGCGG
PROTEIN sequence
Length: 239
MLSVASLAAGRGPGYYLELCNLNYYAEGGEPPPVYHGAAAREMGLSGVEHDRRVIERLCAGYHPETGEALVRNAGKEGRYVGEDCTFSAPKTVSLAFAMADDPLRDAIRTKHLSAVKQALDFLEAEAGFARVGAQGQRLAKVPLLFALFEHATSRAMDPQLHTHALLINLTRHPDGRYTAIDPSHVYKFQMAAGAIYRVALARGMQQLGFEVERRQVGSSIGFEIAGMPKALVDEFSKR