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scnpilot_p_inoc_scaffold_30398_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..400

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pseudomonas sp. CFII64 RepID=S6H8H0_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 132.0
  • Bit_score: 225
  • Evalue 2.50e-56
ABC transporter permease {ECO:0000313|EMBL:KFE51531.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 132.0
  • Bit_score: 225
  • Evalue 3.40e-56
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 132.0
  • Bit_score: 206
  • Evalue 4.40e-51

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Taxonomy

Pseudomonas syringae → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ACCTACGGCGGGCTGGTGCTCGCCCATGTCTGCCTGACCATACCCTGGACGGTGCGCCTGGTGTCCGCCAGCATGCACGGGCTCGATCCTTCCATCATCGAGGCGGCGCGGAACCTGGGCGCGCCGCCGGGTGTGGCGTTCCGCCGGATCACCCTGCCCATGCTCAGGCCCGCCATCGTCGCGGCTTCCCTTTTCAGTTTCGTGGTGTCGTTCGAAAACCTGGAGCTCTCCCTGTCGCTGGTCGGCCCGGGGCGCACCACGCTGCCGATCGCCATCATGCAGTATCTGGAATTCAATCTCGACCCCACGATTGCGGCCGTTTCGGCCATACAGATCCTGTTGCTCGGGGTGGTCATGCTGGTCACTGACCGGTTCGTAAAACTCAGTCAGGTGGTTTGA
PROTEIN sequence
Length: 133
TYGGLVLAHVCLTIPWTVRLVSASMHGLDPSIIEAARNLGAPPGVAFRRITLPMLRPAIVAASLFSFVVSFENLELSLSLVGPGRTTLPIAIMQYLEFNLDPTIAAVSAIQILLLGVVMLVTDRFVKLSQVV*