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scnpilot_p_inoc_scaffold_30536_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1734..2030

Top 3 Functional Annotations

Value Algorithm Source
Putative lytic transglycosylase-like protein, catalytic n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUZ7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 99.0
  • Bit_score: 186
  • Evalue 9.50e-45
Putative lytic transglycosylase-like protein, catalytic {ECO:0000313|EMBL:EYR80387.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 99.0
  • Bit_score: 185
  • Evalue 3.00e-44
lytic transglycosylase-like protein, catalytic similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 99.0
  • Bit_score: 141
  • Evalue 1.70e-31

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
TTGCTGGCGGTCAGCCTCAGCGCTCTGGCGGCGTCTATCTCTGACGCGGAAGCTTCCGTCGGGGCCTGCGAGCGGGAAATCCTTGCCGCCGCCGCGAAATACGACATCCCTGCCGGAATCCTCTATTCTGTCGGTCTCACCGAGACCGGCCGGAAGGGGTCGTTGCAACCCTATGCCATGAACATCGAGGGCAAGGCTTTCTTCGGCCGCGACCGGCGGGATGCCCTGCAAGCCTTCGAGGCGGCGCGTGCGCGCGGCGCCAAGCTGATCGATCTCGGTTGCATGCAGATCAACCAT
PROTEIN sequence
Length: 99
LLAVSLSALAASISDAEASVGACEREILAAAAKYDIPAGILYSVGLTETGRKGSLQPYAMNIEGKAFFGRDRRDALQAFEAARARGAKLIDLGCMQINH