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scnpilot_p_inoc_scaffold_29406_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(78..1058)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000363E0BF similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 330.0
  • Bit_score: 601
  • Evalue 6.90e-169
  • rbh
TRAP-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:GAD22787.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 330.0
  • Bit_score: 601
  • Evalue 9.70e-169
TRAP transporter solute receptor TAXI family protein similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 338.0
  • Bit_score: 587
  • Evalue 2.90e-165

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGTCCGCGAAATTCGTTCTCAACGCACTGGCCACCGCCGCCACCCTGGCGGCAGCCGTTGCCAGCGCCCCGGCCGTGGCGCAGCAGAAATTCGTGACCATCGGCACCGGCGGCGTCACCGGCGTGTACTACGCGGCCGGCGGCGCCATCTGCCGCCTGGTCAACAAGGACCGCGCCAAGCACGGTATCCGCTGCTCGGTCGAATCCACCGGGGGTTCGGTGTTCAACGTCAACACCATCAAGGCCGGCGAGCTCGACCTCGGCTTCACCCAGTCGGACGTGCAGTTCAACGCCGTCAAGGGCATCGGCCAGTTCAAGGACGCCGGTGCCGTGGGCGACCTGCGCGCCGTGTTTGCCGTGCACCCCGAGCCCTTCACCGTGGTGGCCCGCAAGGAGGCCAACATCACCAAGTTCGAGGACTTCAAGGGCAAGCGCTTCAACGTGGGCAATCCCGGCTCGGGAACGCGCTCGTCGATGGAAGAAATGCTCGCGGCCATGGGTTGGAAGCTCTCGGATTTCTCGCTCGCTTCCGAACTGAAGGCCGACGAGCACGGCCCGGCCCTGTGCGACGGCAAGGTGGACGGCTTCTTCTACGGCGTGGGCCACCCCAGCGCCAACATCCAGGACCCCACCACCTCCTGCGGCGCCAAGCTGGTGTCGCTCACCGGCCCGGTGGTGGACAAGCTGGTGGCCGACAAGCCCTACTACGCCAAGGTCACCATCCCGGCCGGCCTGTACCCCAACAACCCCCAGGCCACCAACACGTATGGCGTGCTCGCCACGGTGGTCGCGTCGAGCAAGACCCCGGCCGACACGGTATACGCCGTGACCAAGGCCGTGTTCGACAACTTCGACGAATTCAAGAAGCTGCACCCGGCACTGGCCAACCTCACGCCGCAAAGCATGGTCAAGGACGGTCTGAGCGCACCGCTGCACGAAGGCGCCGCGCGCTACTACAAGGAAAAGGGCTGGATCCAGTAA
PROTEIN sequence
Length: 327
MSAKFVLNALATAATLAAAVASAPAVAQQKFVTIGTGGVTGVYYAAGGAICRLVNKDRAKHGIRCSVESTGGSVFNVNTIKAGELDLGFTQSDVQFNAVKGIGQFKDAGAVGDLRAVFAVHPEPFTVVARKEANITKFEDFKGKRFNVGNPGSGTRSSMEEMLAAMGWKLSDFSLASELKADEHGPALCDGKVDGFFYGVGHPSANIQDPTTSCGAKLVSLTGPVVDKLVADKPYYAKVTIPAGLYPNNPQATNTYGVLATVVASSKTPADTVYAVTKAVFDNFDEFKKLHPALANLTPQSMVKDGLSAPLHEGAARYYKEKGWIQ*