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scnpilot_p_inoc_scaffold_29538_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..301)

Top 3 Functional Annotations

Value Algorithm Source
sigma 54 type regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B5D1DD similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 101.0
  • Bit_score: 141
  • Evalue 6.00e-31
sigma 54 type regulator similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 92.0
  • Bit_score: 117
  • Evalue 2.60e-24
Putative sigma 54 type regulator {ECO:0000313|EMBL:ABK71082.1}; TaxID=246196 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (s similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 92.0
  • Bit_score: 117
  • Evalue 1.30e-23

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Taxonomy

Mycobacterium smegmatis → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGCCACTGAGCGGTGATGAGCTGGTGACGAAGGCCAAGGACGAGTTCCTGTTCCGTGCCGAGACGGCCGCGGGGGTGAACGTCGAGCTGCTGAAGTCCTGGCAGCGGTCGAAGGATGCCCTCGGCGTGCCCGCCAACATCCGCGACGTCCCCCAGGTCGCCGAAGAGCTCCTTGACGCCCACATCCTCGACATGTTCCAGGCGCCGCTCGCACGCGTGTCCGACGACCTGGACGGCACGGGACTGGGACTCCTGCTCGCGGATGCCCGCGGCACGATCCTGCAGCGCTGGTCGCACGAC
PROTEIN sequence
Length: 100
MPLSGDELVTKAKDEFLFRAETAAGVNVELLKSWQRSKDALGVPANIRDVPQVAEELLDAHILDMFQAPLARVSDDLDGTGLGLLLADARGTILQRWSHD