ggKbase home page

scnpilot_p_inoc_scaffold_32930_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..1911

Top 3 Functional Annotations

Value Algorithm Source
excinuclease ABC subunit C n=1 Tax=Microbacterium yannicii RepID=UPI0002E257AA similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 638.0
  • Bit_score: 1068
  • Evalue 0.0
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 622.0
  • Bit_score: 1065
  • Evalue 0.0
uvrC; nuclease subunit of the excinuclease complex similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 630.0
  • Bit_score: 1059
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1911
CGGAGGTGCTCGGGACCTCTGAGCAGCGCCGCAAGGCCGGTTGACGTGGCGGAACAGCTCCCGTACAAGCCGAAGCAGGGGGAGATCCCCACCGATCCCGGCGTGTACCGGTTCCGCGACCCCGCCGGGCGCATCCTCTACGTCGGCAAGGCGAAGAACCTGCGCGCGCGGCTGTCGAACTACTTCGCTCCACTGCGCACCCTCCACGAGCGCACCCGCCGCATGGTGACCACCGCGGCGTCGGTGGAGTGGACGGTCGTGGCGAGCGATGTGGAGGCCCTCCAGCTCGAGTACATGTGGATCCAGGAGTTCTCTCCGCCGTTCAACGTCCGGTACAAGGACGACAAGTCCTATCCGTTCATGGCGATCACGCTCGCGGACGAGGCGCCGCGGGTGATCGTGACGCGCAATCACCGCATCCCTGGCGCGAAGTACTTCGGCCCGTATCCCAAAGTCTGGGCCGTGCACGACACGATCGATCTGATGATCAAGGTGTTCCCGATCCGCACCTGCAGCGACGCGTCGTACAAGAAGGCCATGGCGACCGGGCGCCCCTGCTTCCCCGGTCAGATCGGGCGATGCGGCGGCCCGTGCTCGATGAAGGTGGGGATCGAGGAGCACCGCGCGATCGTGAACGACTTCGTCGCGTTCATGTCGGGCGGCGATGAACGGTTCACGAAGGAGCTCACGCGGCGGATGCGCGAGGCCTCGGCCGCCATGGACTACGAGGCGGCCGCGGGCTACCGCGACAAGCTCCAGGCGATCGACGCGGTACTGAACCGGAGCGCACTGGTCCTCGCGTCGGACATGGACGCGGATCTGTTCGGCATCGCCGAGGACGAGCTCGCCGCGACGGTGCAGCACTTCGTCGTGCGCGGCGGCCGTGTCCGCGGCGTGCGGGCGATCACCATCGAGAAGGAGCTCGACATCAGCGGGGGCGAGCTCGTCGATCAGGTGATCCAGCGCGCCTACGGCGGCGCGAGCGACGCCGACATCCCTCGTCAGATCCTCGTGCCTGTGCTGCCCGACGACGCGACGGAGCTCGAAGCCTGGCTGCGGGAGCGCCGCGGCAAGCTCGTCTCGATCAAGGTGGCGCAGCGCGGACGCAAAGCGGAGCTGATGAAGACCGCCGCACTCAATGCGCAGCAGGCGCTCATGCTCCACAAGACCCGTCGTACCAGCGACTATGTCGCCCGTACCCAGGCGCTCACAGACCTGCAGGAGGCGCTGGGCCTGGCCGAGGCGCCGCTGCGCATCGAGGGTTACGACGTGTCGCACCTCTCGGGGACCAACGTCGTCGCGTCCATGGTGGTCTTCGAGGACGGCCTGCCCCGCAAGGACCAGTACCGGACCTTCGGCGTGCCCGAGACCACGGACGACACCGACTCGATCCACCAGGTGCTCATGCGGCGCCTCGCGTATCTCGATCGACCCGAGGAGAACGAGCCGCCCGAACCCACGGAGGCGGCCCTGCAGGACGGTGAGGTCGTCACGACGCGCCGGCGTCCGCGCTTCGCCTATCCTCCTCAGCTGCTCGTGGTCGACGGGGGCAAGCCGCAGGTGGAGGCGGCGGCGCGGGCGCTCGCGGACGCGGGCCACGAGGAGATCGCGCTGTGCGGGATCGCCAAGCGGCTCGAGGAGGTCTGGCTGCCGGGCGAGGACTTCCCGGTGATCCTGCCACGCACGTCCGAGGCGCTCTACCTGCTCCAGCGTCTGCGGGACGAGGCGCATCGGTTCGCGATCATCCATCAGCGCAAGCGGCGCAAGCGCGACATCAGCACGGTCCTCGCGGAGGTCCCCGGCCTCGGGGATGCCCGCATCCGGGCGCTCCTGCGTCATTTCGGGTCGGTGACCGCCCTCCGGAGCGCCACGGAGGACGAGATCGCCCAGCTCCCGGGTATCGGTCCCAAG
PROTEIN sequence
Length: 637
RRCSGPLSSAARPVDVAEQLPYKPKQGEIPTDPGVYRFRDPAGRILYVGKAKNLRARLSNYFAPLRTLHERTRRMVTTAASVEWTVVASDVEALQLEYMWIQEFSPPFNVRYKDDKSYPFMAITLADEAPRVIVTRNHRIPGAKYFGPYPKVWAVHDTIDLMIKVFPIRTCSDASYKKAMATGRPCFPGQIGRCGGPCSMKVGIEEHRAIVNDFVAFMSGGDERFTKELTRRMREASAAMDYEAAAGYRDKLQAIDAVLNRSALVLASDMDADLFGIAEDELAATVQHFVVRGGRVRGVRAITIEKELDISGGELVDQVIQRAYGGASDADIPRQILVPVLPDDATELEAWLRERRGKLVSIKVAQRGRKAELMKTAALNAQQALMLHKTRRTSDYVARTQALTDLQEALGLAEAPLRIEGYDVSHLSGTNVVASMVVFEDGLPRKDQYRTFGVPETTDDTDSIHQVLMRRLAYLDRPEENEPPEPTEAALQDGEVVTTRRRPRFAYPPQLLVVDGGKPQVEAAARALADAGHEEIALCGIAKRLEEVWLPGEDFPVILPRTSEALYLLQRLRDEAHRFAIIHQRKRRKRDISTVLAEVPGLGDARIRALLRHFGSVTALRSATEDEIAQLPGIGPK