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scnpilot_p_inoc_scaffold_34437_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1019..1681)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=2 Tax=Microbacterium RepID=H8E523_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 220.0
  • Bit_score: 425
  • Evalue 3.50e-116
  • rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans O similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 220.0
  • Bit_score: 425
  • Evalue 4.90e-116
rplD; ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 220.0
  • Bit_score: 367
  • Evalue 2.50e-99

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGGCTGACTCGACTCTCGCGCTCGACGTCCACAGCCCCAGTGGCAAGAAGGCCGGCTCGGTCGCCCTTCCCGCTGCGCTGTTCGACGTCAAGACGAACATCCCGCTGATCCACCAGGTCGTCGTCGCGCAGCTCGCGGCGGCTCGCCAGGGCACGCACTCGACCAAGCGTCGTGGCGAGGTCTCCGGTGCCGGCCGCAAGCCCTTCAAGCAGAAGGGCACGGGTAACGCCCGTCAGGGCTCCATCCGCGCGCCGCACATGACCGGTGGTGGCATCGTCCACGGTCCGAAGCCGCGCGACTACTCGCAGCGCACCCCCAAGAAGATGATCGCCGCCGCCCTCCTGGGCGCGCTGAGCGACCGTGCTCGCGGTGGTCGTCTGCACGTCGTGGACTCCTTCGGCATCGAGGGCGCCCCGTCGACCAAGGCCGCTGCGGCCGTCCTCGCCGAGCTCGCTCCGACCAAGAACGTCCTGGTCGTCATCGAGCGCGGTGACGAGCTGGCGGTCAAGAGCGTGCGCAACCTCGCGTACGTCCACGTCCTCAGCTTCGACCAGCTGAACGCCTACGACGTGCTCGTCTCCGACGACATCGTCTTCACCAAGGCCGCCTACGACGCGTTCGTCGCGTCCAAGAGCGCCACCACCGAGGAGGTCTCGGCATGA
PROTEIN sequence
Length: 221
MADSTLALDVHSPSGKKAGSVALPAALFDVKTNIPLIHQVVVAQLAAARQGTHSTKRRGEVSGAGRKPFKQKGTGNARQGSIRAPHMTGGGIVHGPKPRDYSQRTPKKMIAAALLGALSDRARGGRLHVVDSFGIEGAPSTKAAAAVLAELAPTKNVLVVIERGDELAVKSVRNLAYVHVLSFDQLNAYDVLVSDDIVFTKAAYDAFVASKSATTEEVSA*