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scnpilot_p_inoc_scaffold_34305_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1366..1848)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKY6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 160.0
  • Bit_score: 312
  • Evalue 3.20e-82
Transcription termination factor Rho {ECO:0000313|EMBL:EIL87877.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 160.0
  • Bit_score: 312
  • Evalue 4.40e-82
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 160.0
  • Bit_score: 310
  • Evalue 3.40e-82

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
GACGTGGTGATCCTGCTCGACTCGATCACCCGCCTCGCCCGCGCCTACAACACCGTGGTGCCCAGCTCCGGCAAGGTGCTCACCGGCGGCGTGGACGCCAACGCGCTGCAGCGCCCGAAGCGCTTCTTCGGCGCCGCGCGCAACGTGGAGGAAGGCGGCAGCCTCACCATCATCGCCACCGCGCTGATCGACACCGGCAGCAAGATGGACGAGGTGATCTACGAGGAGTTCAAGGGCACCGGCAACATGGAAGTGCACCTGTCCCGCCGCATCTCCGAGAAGCGCGTCTACCCCGCCATCGACATCAACCGCTCCGGCACCCGCCGCGAGGACCTGCTGATCGAGCCGGACATGCTGGCGAAGATCTGGATCCTGCGGAAACTGCTGCACCCGATGGACGAGCTGGCCGCGATGGAGTTCATGCTCGACAAGATGAAGAACACCAAGTCGAACGACGAGTTCTTCAATTCGATGAAGCGCTGA
PROTEIN sequence
Length: 161
DVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMEVHLSRRISEKRVYPAIDINRSGTRREDLLIEPDMLAKIWILRKLLHPMDELAAMEFMLDKMKNTKSNDEFFNSMKR*