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scnpilot_p_inoc_scaffold_34878_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 213..1706

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPE7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 497.0
  • Bit_score: 897
  • Evalue 5.50e-258
  • rbh
Type VI secretion protein, EvpB/VC_A0108 family {ECO:0000313|EMBL:EYR83978.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shin similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 497.0
  • Bit_score: 897
  • Evalue 7.70e-258
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 498.0
  • Bit_score: 767
  • Evalue 1.80e-219

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGAGTGCTGAACTGCAGAAACAGACCGCCGCCGCCACGGAAGAGTCCACCGGCTCGCTGAGCCTCCTCGACCAGGCGATCCAGGTCACCAAGACCGCCGAGCCGGACGAGATGCAGGATCTCCTGCGCACCCTCACAGACGAGGCGCTGGCCGGCACCGTCACCTTCTCGAAGAACCTGACGCAGACCTTCAACAAGGCGATCGAGGCCATCGACCAGAAGCTGTCGCAGCAGCTGAGCCAGATCATGCATCACCCGGACTTCCAGAAGCTGGAAGGGTCCTGGCGCGGCCTGAACTATCTGGTGAAGAACTCGGAAACCAGCGCGACGCTGAAGATCCGCGTTCTCAACGAATCCAAGAAGGAACTGCACAAGGATCTGACCAAGGCGGTCGAATTCGATCAGAGCCAGACCTTCAAGAAGATCTATGAAAGCGAATTCGGCACCCCCGGCGGCGAGCCCTACGGCGCGCTGATCGGCGATTTCGAATTCGGCAACGGCACCGAGGATCTCGAAATCCTGCAGGGCATGTCGAACATCGCGGCCGCGTCCTTCGCGCCGTTCATCTCCGCCGCCAGCCCGAAGATGTTCGGCCTGGAAAGCTTCACGGAACTTTCCAAGCCGCGCGATCTCGAGAAGATCTTCGAAAGCTCGGAATACATCAAGTGGCGCAGCTTCCGCGACAGCGACGATAGCCGCTTCGTGACGCTGACCATGCCGCGCGTGCTCGCCCGCGTGCCCTACGGTTCGCAGGGCCGGGCGATCGAGGAGTTCAAGTTCGAGGAAGCCCCGATCGACGCCAACGGCGTCGTCAGCGCCATGCCGCAGGACAAGTTCTCCTGGATGAACGCATCCTACGCGCTGGGCGAACGCCTGAACTTCGCCTTCGCGAAGTATGGCTGGTGCGTGGCCATCCGCGGTGCCGAGGGTGGCGGCAAGGTCGAGGATCTGCCGAGCTTCACCTTCACCAGCGACGACGGCGACGCCGACCAGCAGTGCCCGACGGAAATCGGCATCACCGATCGCCGCGAGGCCGAACTGTCGAAGCTCGGCTTCCTGCCGCTGTGCCACTATAAGAATACGGATTACGCCGTCTTCTTCGGGGCGCAGACCACGCAGAAGCCGAAGAAATACGACCGGCCGGAAGCCACCGCAAATGCGGCGATTTCCGCCCGCCTGCCGTATATCATGGCGACCTCGCGTTTCTCGCACTACCTCAAGGTCATGGGCCGCGACAAGATCGGCTCCTTCCTCGAAGCCAGCGATTGCGAGACCTGGCTGAACAACTGGATCCGCAACTATGTGAATGGCAATGCGGAAGCCGGCCAGGAAATGAAGGCGCAGTATCCGCTCGCCGAAGCGCAGGTGACCGTCAAGGAAGTTCCCGGCGCGCCGGGTTCCTACAATGCGGTCGCCTATCTGCGCCCCTGGTTGCAGATGGAAGAGCTGACGGCGTCCATGCGCCTTGTGGCACGCATTCCGCAGATGGGTTGA
PROTEIN sequence
Length: 498
MSAELQKQTAAATEESTGSLSLLDQAIQVTKTAEPDEMQDLLRTLTDEALAGTVTFSKNLTQTFNKAIEAIDQKLSQQLSQIMHHPDFQKLEGSWRGLNYLVKNSETSATLKIRVLNESKKELHKDLTKAVEFDQSQTFKKIYESEFGTPGGEPYGALIGDFEFGNGTEDLEILQGMSNIAAASFAPFISAASPKMFGLESFTELSKPRDLEKIFESSEYIKWRSFRDSDDSRFVTLTMPRVLARVPYGSQGRAIEEFKFEEAPIDANGVVSAMPQDKFSWMNASYALGERLNFAFAKYGWCVAIRGAEGGGKVEDLPSFTFTSDDGDADQQCPTEIGITDRREAELSKLGFLPLCHYKNTDYAVFFGAQTTQKPKKYDRPEATANAAISARLPYIMATSRFSHYLKVMGRDKIGSFLEASDCETWLNNWIRNYVNGNAEAGQEMKAQYPLAEAQVTVKEVPGAPGSYNAVAYLRPWLQMEELTASMRLVARIPQMG*