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scnpilot_p_inoc_scaffold_35971_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..130

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Rhizobium giardinii RepID=UPI00037097CC similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 42.0
  • Bit_score: 71
  • Evalue 3.30e-10
Cold shock protein {ECO:0000313|EMBL:EYR81773.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 42.0
  • Bit_score: 82
  • Evalue 2.00e-13
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 42.0
  • Bit_score: 68
  • Evalue 5.90e-10

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 129
TTCGTCCACATCTCCGCCGTTCAGCGCGCCGGCCTCGCTGCACTCAACGAAGGTCAGAAGGTCAGCTTCGAGCTGATCCGCGACCGCAAGTCGGGCAAGATGTCGGCTGACCAGCTCGTCGCAGCCTGA
PROTEIN sequence
Length: 43
FVHISAVQRAGLAALNEGQKVSFELIRDRKSGKMSADQLVAA*