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scnpilot_p_inoc_scaffold_38597_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..533)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Rhizobium meliloti RepID=UPI0003168AD4 similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 179.0
  • Bit_score: 243
  • Evalue 2.00e-61
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEQ04789.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 167.0
  • Bit_score: 250
  • Evalue 1.80e-63
attC; Spermidine/putrescine-binding periplasmic protein SPBP; Flags: Precursor similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 170.0
  • Bit_score: 240
  • Evalue 2.80e-61

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Taxonomy

Rhizobium sp. R2-400B4 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGATCACCAAACTCGGAATTGGGACCACAGCTTCAGTCGCATTGGCCGCTACGATATTGGCGACCGCGTGCAGCAGCGCTCTGGCGGGCGAACGTGTTGTCATTGCATCGACCGGCGGCGCATATGATCGCGCTCTGAAGGAAGCCTGGTTCGATCCGTTCACCAAGGAAACCGGCATCGAGGTGGTCGTGGTCTCTGCGACGAATGCAGAGATGCGCGCCAAGGCATCGGCAATGGTGAAGTCCGGCAATGTGACCTGGGATCTTTACCTTGACGGAGAGATCCAGGCTGGGTCCGAAGCGCACAAGGCCGCGACCGAGGATTTGTCGGAATTTTGCAAGCCCTACAAGGACCGGGCCGACCTGGTGGCGAATGCATGTGAACCGGGGGGTGCACTGCTGCAGTCGACGGCCACGTTGCTCGCCTACCGCTCCCGAGCAGATGCGGATGCGACACCTGAGACATGGGGGGATATGTGGGACATCGAGCGTTTTCCAGGTGGCCGGGCGTTCCCCAATTTCGATGACCCA
PROTEIN sequence
Length: 177
MITKLGIGTTASVALAATILATACSSALAGERVVIASTGGAYDRALKEAWFDPFTKETGIEVVVVSATNAEMRAKASAMVKSGNVTWDLYLDGEIQAGSEAHKAATEDLSEFCKPYKDRADLVANACEPGGALLQSTATLLAYRSRADADATPETWGDMWDIERFPGGRAFPNFDDP