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scnpilot_p_inoc_scaffold_37003_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..579

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ17_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 184.0
  • Bit_score: 119
  • Evalue 4.70e-24
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC68909.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. L similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 185.0
  • Bit_score: 264
  • Evalue 1.70e-67
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 163.0
  • Bit_score: 62
  • Evalue 1.90e-07

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATCAGCCTGTTCCTCACCATGCACGCGACTACCGTCTCGCGCGACGCCGGCGGCATCGAGATCGTCATCATCAGCACGCGCAGCCGGCTGAACCTCGCCCGCGGCGAGGCCGACATCGCCCTCAGGATGAGCAAGCCGCCGCAGGAGCCCGGCTACTACGCCCAGAAGATCGGCCGGCTGATGCAGGCGCTCTACTGCCGCCGCGACGTCGACCCCGCCACGGCCCCGATCATCTCGGTCAATCGCGAGACGTCCTCGCGCATCGACAACCACATCGTGGCTTTCGCTGCGGGCCGCCCCATCGCGGCGCGCGTCGGCGATTCGGCGGCGCGCTACGAAAGCATCCGCTCGGCCGGCGCGTTGTCGATGGCGCCCTGCTTCATGGCCGATGCCGATCCCGGCCTGCGGCGCCTGGAGCCGCCGCCCGAGGCGACCGGCGACGACATCTTCCTGCTTTCGCATGACGTCTCGCGCCAGCGAGCCGGAGTGGGCGCAGTGCTGGCGGCGCTGCGGAAGCTGTTCCGCCAGCACTGCGCCCGGCTGGAAGGGCTACCGCTCGAAGACGGTCCCCCGTCGTGA
PROTEIN sequence
Length: 193
ISLFLTMHATTVSRDAGGIEIVIISTRSRLNLARGEADIALRMSKPPQEPGYYAQKIGRLMQALYCRRDVDPATAPIISVNRETSSRIDNHIVAFAAGRPIAARVGDSAARYESIRSAGALSMAPCFMADADPGLRRLEPPPEATGDDIFLLSHDVSRQRAGVGAVLAALRKLFRQHCARLEGLPLEDGPPS*