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scnpilot_p_inoc_scaffold_37009_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..687

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2RQ22_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 227.0
  • Bit_score: 355
  • Evalue 3.60e-95
LysR family transcriptional regulator {ECO:0000313|EMBL:KGD99672.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 227.0
  • Bit_score: 358
  • Evalue 1.00e-95
Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 227.0
  • Bit_score: 356
  • Evalue 5.90e-96

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
TCCGACATCCTGAAAGAAATCGACAACCTCGCCGACCTCGTGCGCGAAAACAATGCCGACCTCAAGGGGCGGCTGCGCATTTCGGCGCCGCGCACCTATATGGACGACGATATCGGCCACTCCTTGATCGATTTCGCCAAGGCCCATCCGGACCTGTCGCTGGAAATCCTTTCGGAAGACCGCTTCGTCGATCTGATCGAGGAAGGGTTCGACGTGGCGATCCGCATCACCAAGCTGGAAGATTCCGGCATGATCGCCCGCAAGCTTGCCGATTTCCGCATCTATGTCTGCGCCACGCCGGAATTCATCGAAAAGCACGGGCCGCTGAACCACCCCAACGATCTCTCCGGCGTCCCCTTCATCATCGATACCAACACCCGCTCCCACAACAATATCCGTTTCGTCGAGCGTGACGGCTCGGCGTTTTCCGTTCCCGTCACCGGACCGATCGAGGTGAACAGCCCGCTGGCGACGCTGCGGGCGGCCCGCGCCGGGCTCGGCGTCGCCGCCGTGCCGGACTTCGTCGCCCGCGCCGTGATCGACTCCGGCGAAATGGTCAGCCTGTTCGACGAATACCTGCCGGCCGACCGCGGCATCTATGCCGTCTATCCGCACCGCCGTTACCTGCCGGCAAAAGTTCGGACCTTCGTCGATTTCCTGTCAAACTGGTTCCGTAAAAGGGACTGA
PROTEIN sequence
Length: 229
SDILKEIDNLADLVRENNADLKGRLRISAPRTYMDDDIGHSLIDFAKAHPDLSLEILSEDRFVDLIEEGFDVAIRITKLEDSGMIARKLADFRIYVCATPEFIEKHGPLNHPNDLSGVPFIIDTNTRSHNNIRFVERDGSAFSVPVTGPIEVNSPLATLRAARAGLGVAAVPDFVARAVIDSGEMVSLFDEYLPADRGIYAVYPHRRYLPAKVRTFVDFLSNWFRKRD*