ggKbase home page

scnpilot_p_inoc_scaffold_37035_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(672..1739)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent Transducer n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L2E0_ZOBGA similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 357.0
  • Bit_score: 462
  • Evalue 3.20e-127
Uncharacterized protein {ECO:0000313|EMBL:ETZ20201.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4 similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 355.0
  • Bit_score: 502
  • Evalue 5.10e-139
TonB-dependent transducer similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 357.0
  • Bit_score: 462
  • Evalue 9.10e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1068
ATTGCCTCACAAGACCGTACCTGGGAAACCATTGAAACAAAAAACGCGGGTCTTGATTTTGCATTTTTAAATTCAAGGCTGACCGGGAGCTTTGACTATTACATCAAGAACAACAGGAACATGCTGGTAAATGACCAGTTGCCGGCAACGCTGGGCGGATCTGCACCCACACAAAATATCGGTAAGCTGGAAACAAAAGGCTGGGACTTTTCTATAGGATGGAGTGATAAGGTCGGCGGCGTCAGGTATAGTGTTTCAGCAATGCTCAGCGATAGTAAAAACAAATTAATAGAGCTGAAAGGAAATGATGCTTATGGAGAAGGGCTGATTTATGCACGGAAAGGCTATTCATTGAATTCTTATTTCGGCTATCAGTTTGATGGTATTATTCAAAATGAAGAACAATTAACTGCTTACAAACAATTAGGTAATGTACCTTCTAACCTGGGTGTAGGCGATGTAATGTTCAGGGATGTTGATGGTGATGGGAAAATTACGGCTTTTGGAGATGCTTCAAAAGGCACATCAGGAGATATGGTATATCTTGGGAACCTGCTTCCCAGGTATACATATTCATCCAATATCAGCGTATCCTATAAAGGATTTGACTTAAGTATCTTTTTACAGGGTATAGGAAAAAGGCAGGGTATCAGAACAGGAGAAATCAGCGTACCGCTATGGCAGGTATGGATGCAACCCCTGGAATACTTCTATGGTAAGAACTGGACTCCTGAAAACCCTGATGCAAAATTCCCCCGTATTATACCCGGCTCCGTTGGCTTTGATGGAATACGCAATTGGAACTGGAGGTACTCTTCCATGCGCATGAACAACCTTGCTTACCTTAGGTTTAAGGTAGTGACCTTAGCGTACAATTTACCTCAGTACTTAGTCAGCAAAGCTAAAGTGAAAAATATTCGTATATACGTTAGCGGGCAGGATCTGTTTACTTTTTCAAAAGATACATGGAATAAATCGTTCGACCCCGAAGAAACATGGGAACGCTCTGATGAGCAAACCTATCCTTTCAACAGTGTAATTTCTTTTGGACTGGATATTAAATTCTAA
PROTEIN sequence
Length: 356
IASQDRTWETIETKNAGLDFAFLNSRLTGSFDYYIKNNRNMLVNDQLPATLGGSAPTQNIGKLETKGWDFSIGWSDKVGGVRYSVSAMLSDSKNKLIELKGNDAYGEGLIYARKGYSLNSYFGYQFDGIIQNEEQLTAYKQLGNVPSNLGVGDVMFRDVDGDGKITAFGDASKGTSGDMVYLGNLLPRYTYSSNISVSYKGFDLSIFLQGIGKRQGIRTGEISVPLWQVWMQPLEYFYGKNWTPENPDAKFPRIIPGSVGFDGIRNWNWRYSSMRMNNLAYLRFKVVTLAYNLPQYLVSKAKVKNIRIYVSGQDLFTFSKDTWNKSFDPEETWERSDEQTYPFNSVISFGLDIKF*