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scnpilot_p_inoc_scaffold_37070_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(403..969)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CE12_THET1 similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 170.0
  • Bit_score: 105
  • Evalue 6.90e-20
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 170.0
  • Bit_score: 105
  • Evalue 1.90e-20
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACZ41168.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 170.0
  • Bit_score: 105
  • Evalue 9.70e-20

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Taxonomy

Thermobaculum terrenum → Thermobaculum → Bacteria

Sequences

DNA sequence
Length: 567
ATGCCCGAATTGTTGCCTGCTCAGTCCTCTCCCACTTTGATGCTCGATTTTAATACGCTGGAAGACCTCTATAGCCGCTACGGACGCCAGGCTTTCGGGCTGGCTTTGCGAATATTGGAAGATAAAACCGCCGCCGAACAGGCTATCCAGGAGGTCTTTTTGCGCTACTGGCGGCAACCGGACCTCTACGAACCACAAAACGGTCCCTTTCTGAACTGGCTGTTGCGGGAGGTGCATTGTTATTGCCTGGACCGCCTTCCGGCAAACCTTTTCCAACCGCATAACGCCCTGTTGGTCAAAGGTCCCCTTTCCACCGAAATTGTTTTGAAAAGCCAATCCGACCTGGGTGAAGCAAGTCCGGGAGCGTCCCGGCAATTGCTGGCCCGGCAAGCCCTGGCCGGTCTACCCCAGGAGCAGCGCGAAATCGTGGAAATGGCTTACTTCAAGGGTTTGAATCACCAACAAATTGCCCGGCTTACCGGATATTCCGCCCAGTGTGTGCGGCAGCAACTAACTGTGGGGCTTGTCCGACTTAAACGTGGCATGGCTCAATATAACCCGGTATAA
PROTEIN sequence
Length: 189
MPELLPAQSSPTLMLDFNTLEDLYSRYGRQAFGLALRILEDKTAAEQAIQEVFLRYWRQPDLYEPQNGPFLNWLLREVHCYCLDRLPANLFQPHNALLVKGPLSTEIVLKSQSDLGEASPGASRQLLARQALAGLPQEQREIVEMAYFKGLNHQQIARLTGYSAQCVRQQLTVGLVRLKRGMAQYNPV*