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scnpilot_p_inoc_scaffold_37112_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(804..1370)

Top 3 Functional Annotations

Value Algorithm Source
ECF sigma factor family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWZ9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 378
  • Evalue 5.50e-102
  • rbh
ECF sigma factor family protein {ECO:0000313|EMBL:ENY82769.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphing similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 378
  • Evalue 7.70e-102
ECF sigma factor family protein similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 164.0
  • Bit_score: 162
  • Evalue 1.30e-37

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGCGCGTCATGCGGGGAGATGGGCGATCAACGAGGAACCGGGTCGTGCGGGCAGCATCGACGGCGACGCCGACGCGCTCATCGCCACGCTGTATGACGAACTCAAGATCATCGCGCGCCGCGAACATTATCGCGCGGGCGGCGGACAGACACTGCAAACGACGGCGCTGGTTTCGGAAGCCTATCTGAAACTGAGCAAACGCAACGACTGGGAAAGCGAACGCCACTTCCTCGGCTGCGCGGCGACCGCCATCCGCCACATCCTGATCGACGCCGCGCGCGCCCGCATGACGGCGAAGCGTGGCGCGGGCGACTATGCCTTTACCGAAAGCCTCGATTCGCTCGCCGCGGCGGCGCCCGAGGACGAGGATGTCGTGCGGCTGGGTGAGGCGTTGCAACGGCTGGCGCGCCTCGACCCCAATCTCGCGCAACTGATCGACTGCCGCTTCTTCGCCGGGATGACCGAAGAGGAGACCGCAAAGGTCCTGGGCGTCAGCGACCGGACGGTGCGCCGCTGGTGGCTCCAGGCGCGGGCCTGGGTGCACAAGGAAATGGACGCGGGCTAG
PROTEIN sequence
Length: 189
MARHAGRWAINEEPGRAGSIDGDADALIATLYDELKIIARREHYRAGGGQTLQTTALVSEAYLKLSKRNDWESERHFLGCAATAIRHILIDAARARMTAKRGAGDYAFTESLDSLAAAAPEDEDVVRLGEALQRLARLDPNLAQLIDCRFFAGMTEEETAKVLGVSDRTVRRWWLQARAWVHKEMDAG*