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scnpilot_p_inoc_scaffold_37184_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(437..904)

Top 3 Functional Annotations

Value Algorithm Source
MarR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037EC81B similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 154.0
  • Bit_score: 263
  • Evalue 1.60e-67
Transcriptional regulator {ECO:0000313|EMBL:EJL69232.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 155.0
  • Bit_score: 242
  • Evalue 4.20e-61
transcriptional regulator, MarR family similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 155.0
  • Bit_score: 220
  • Evalue 2.60e-55

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGCGCCTGGGCACGTCGCTCGCGGTGCTGCAGCGCGGCTACCGCGCCGCGGCCGACAAGGCGGTGGCGCATGTCGGCGTGTCGCAGACGCTGGCCTACCCGATCGTGATGCTCGGGCGCATGAACGGCGAAGTGCGCCAGGGCGTGCTGGCCGAGGCGCTGGGCATCGAAGGGCCGTCGCTGGTGCGCTCGGTCGACCAGCTGGTGGAAGCCGGCCTCGTCGAACGCCGCGAAGACCCGGCCGACCGCCGCGCCAAGACGCTGCACCTCACCGAAGCCGGCCAGGCCGTTTGCGCGCCCATCGAGGCGGCGCTGACGCTGATGCGGGTGTCGCTGTTCGACGGCGTGTCCGACGATGACGTCGCCGCCTGCCTGCGCGTGTTCTCGGTGCTCGAGGAGCGCATGGGCGTTCGCGCCGTGCAGAACCCGCCGCCCCCGCCCGCGCCACCACAGGAAGGGCGCAAGTAA
PROTEIN sequence
Length: 156
MRLGTSLAVLQRGYRAAADKAVAHVGVSQTLAYPIVMLGRMNGEVRQGVLAEALGIEGPSLVRSVDQLVEAGLVERREDPADRRAKTLHLTEAGQAVCAPIEAALTLMRVSLFDGVSDDDVAACLRVFSVLEERMGVRAVQNPPPPPAPPQEGRK*